Literature DB >> 33490537

Ten fish mitogenomes of the tribe Gobionini (Cypriniformes: Cyprinidae: Gobioninae).

Yuhuo Li1, Kai Cao1, Cuizhang Fu1.   

Abstract

Freshwater fishes of the subfamily Gobioninae (Cypriniformes: Cyprinidae) are composed of three major clades, the tribes Gobionini and Sarcocheilichthyini, and a Hemibarbus-Squalidus group. In this study, we determined ten complete fish mitogenomes from eight of all twelve genera in the tribe Gobionini. The ten mitogenomes displayed similar patterns in gene arrangements, codon use and gene overlaps with the length of 16,605-16,617 bp and base compositions slightly A + T bias of 56.1-58.0%. Our phylogeny of the tribe Gobionini revealed that the genera Gobio, Xenophysogobio, Gobiobotia, Saurogobio and Pseudogobio were monophyletic, and other genera Abbottina, Biwia, Microphysogobio and Platysmacheilus were paraphyletic or polyphyletic. The findings indicate that the genera classifications of Gobionini are needed to be further confirmed.
© 2018 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group.

Entities:  

Keywords:  Cyprinidae; Gobioninae; Gobionini; mitochondrial genome; phylogeny

Year:  2018        PMID: 33490537      PMCID: PMC7800260          DOI: 10.1080/23802359.2018.1467236

Source DB:  PubMed          Journal:  Mitochondrial DNA B Resour        ISSN: 2380-2359            Impact factor:   0.658


  6 in total

1.  Complete mitochondrial genome of Pseudorasbora elongata (Cypriniformes: Cyprinidae).

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2.  Phylogeny of the gudgeons (Teleostei: Cyprinidae: Gobioninae).

Authors:  Kevin L Tang; Mary K Agnew; Wei-Jen Chen; M Vincent Hirt; Morgan E Raley; Tetsuya Sado; Leah M Schneider; Lei Yang; Henry L Bart; Shunping He; Huanzhang Liu; Masaki Miya; Kenji Saitoh; Andrew M Simons; Robert M Wood; Richard L Mayden
Journal:  Mol Phylogenet Evol       Date:  2011-06-06       Impact factor: 4.286

3.  A simple salting out procedure for extracting DNA from human nucleated cells.

Authors:  S A Miller; D D Dykes; H F Polesky
Journal:  Nucleic Acids Res       Date:  1988-02-11       Impact factor: 16.971

4.  Complete mitochondrial genome of the freshwater gudgeon, Gobiobotia nakdongensis (Cypriniformes, Gobioninae).

Authors:  Dae-Sik Hwang; Hwa Kun Byeon; Jae-Seong Lee
Journal:  Mitochondrial DNA       Date:  2013-02-06

5.  MrBayes 3.2: efficient Bayesian phylogenetic inference and model choice across a large model space.

Authors:  Fredrik Ronquist; Maxim Teslenko; Paul van der Mark; Daniel L Ayres; Aaron Darling; Sebastian Höhna; Bret Larget; Liang Liu; Marc A Suchard; John P Huelsenbeck
Journal:  Syst Biol       Date:  2012-02-22       Impact factor: 15.683

6.  RAxML version 8: a tool for phylogenetic analysis and post-analysis of large phylogenies.

Authors:  Alexandros Stamatakis
Journal:  Bioinformatics       Date:  2014-01-21       Impact factor: 6.937

  6 in total
  5 in total

1.  The complete mitochondrial genomes of Gobiobotia meridionalis (Cypriniformes: Cyprinidae).

Authors:  Qin Ma; Lin Chen; Yuwen Tan; Yan Ren
Journal:  Mitochondrial DNA B Resour       Date:  2021-04-26       Impact factor: 0.658

2.  Two mitochondrial genomes of freshwater gudgeons in the genus Gobio (Cypriniformes: Gobionidae).

Authors:  Tianyu Yi; Cuizhang Fu
Journal:  Mitochondrial DNA B Resour       Date:  2020-07-30       Impact factor: 0.658

3.  Three mitochondrial genomes of Pseudogobio fishes (Cypriniformes: Gobionidae).

Authors:  Junwei Fu; Cuizhang Fu
Journal:  Mitochondrial DNA B Resour       Date:  2020-07-29       Impact factor: 0.658

4.  A new species of the gudgeon genus Huigobio Fang, 1938 (Cypriniformes: Cyprinidae) from the Yangtze River Basin, southern China.

Authors:  Zhi-Xian Sun; Xue-Jian Li; Wen-Qiao Tang; Ya-Hui Zhao
Journal:  Zool Res       Date:  2022-01-18

5.  Phylogeographical Analysis of the Freshwater Gudgeon Huigobio chenhsienensis (Cypriniformes: Gobionidae) in Southern China.

Authors:  Xishu Yang; Xiaomin Ni; Cuizhang Fu
Journal:  Life (Basel)       Date:  2022-07-09
  5 in total

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