Literature DB >> 33490492

Characterization of the complete chloroplast genome of Allium prattii.

Fang-Yu Jin1, Deng-Feng Xie1, Song-Dong Zhou1, Xing-Jin He1.   

Abstract

The genus Allium is one of the world's largest monocot genera. However, few reports on the complete chloroplast genome of Allium plants are reported. In this study, we reported the complete chloroplast genome of Allium prattii. The genome sequence was 154,482 bp in length, including a large single copy region (LSC) of 83,392 bp and a small single copy region (SSC) of 18,064 bp, which were separated by two inverted repeat (IR) regions of 26,513 bp. The complete chloroplast genome contains 131 genes, including 85 protein-coding genes, 38 tRNA genes, and 8 rRNA genes. Phylogenetic analysis with several reported chloroplast genomes showed that A. prattii has a close genetic relationship with A. cepa and A. sativum.
© 2018 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group.

Entities:  

Keywords:  Allium prattii; complete chloroplast genome; phylogenetic analysis

Year:  2018        PMID: 33490492      PMCID: PMC7800986          DOI: 10.1080/23802359.2018.1436994

Source DB:  PubMed          Journal:  Mitochondrial DNA B Resour        ISSN: 2380-2359            Impact factor:   0.658


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