Literature DB >> 33490400

Phylogenetic studies of Prunella strophiata (Passeridae: Prunella) based on complete mitochondrial DNA sequences.

Xiaonan Sun1, Zhonglou Sun1, Dingzhen Liu2, Wenliang Zhou2.   

Abstract

Rufous-breasted Accentor (Prunella strophiata) is a small-sized bunting with an extremely geographical range in the world. Here, the complete mitochondrial genome of P. strophiata (16,830 bp in length) has been analyzed for building the database. Similar to the typical mtDNA of vertebrates, it contained 37 genes (13 protein-coding genes, two rRNA genes and 22 tRNA genes) and a non-coding region (D-loop). Overall base composition of the complete mitochondrial DNA is A (30.3%), G (14.7%), C (31.0%) and T (24.0%), the percentage of A and T (54.3%) is higher than G and C (45.7%). All the genes in P. strophiata were distributed on the H-strand, except for the ND6 subunit gene and 9 tRNA genes which were encoded on the L-strand. The phylogenetic relationships of 12 Passeriformes species were reconstructed based on the complete mtDNA sequences using the Bayesian inference method.
© 2016 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group.

Entities:  

Keywords:  Mitochondrial genome; Passeriformes; Prunella strophiata; phylogenetic relationships

Year:  2016        PMID: 33490400      PMCID: PMC7800335          DOI: 10.1080/23802359.2016.1181994

Source DB:  PubMed          Journal:  Mitochondrial DNA B Resour        ISSN: 2380-2359            Impact factor:   0.658


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  5 in total

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