| Literature DB >> 33488881 |
Honghua Yue1, Jun Gu1, Xueshan Zhao1, Weitao Liang1, Zhong Wu1.
Abstract
Entities:
Year: 2021 PMID: 33488881 PMCID: PMC7811314 DOI: 10.5114/aoms/130392
Source DB: PubMed Journal: Arch Med Sci ISSN: 1734-1922 Impact factor: 3.318
Figure 1A – Transcriptome experimental workflow. B – Heatmap of hierarchical clustering of DEGs among the blank group, AF group and Drugs treatment group (X axis represents each comparing sample. Y axis represents DEGs. Colouring indicates the log2 transformed fold change. High: red, Low: blue). C – The GO classification results among the blank group, AF group and Drugs treatment group (X axis represents number of DEG. Y axis represents GO term). D – Pathway classification of DEGs among the blank group, AF group and Drugs treatment group (X axis represents enrichment factor. Y axis represents the pathway name. The color indicates the q-value (high: white, low: blue), the lower q-value indicates the more significant enrichment. Point size indicates DEG number (The bigger dots refer to larger amounts). Rich Factor refers to the value of the enrichment factor, which is the quotient of foreground value (the number of DEGs) and background value (total Gene amount). The larger the value, the more significant enrichment
Details of key genes in the combination of DEGs in the IL-17 pathway
| Gene ID | Variation type | Symbol | Kegg Orthology (IL-17 pathway) | Fold change | |
|---|---|---|---|---|---|
| 301289 | Up-to-down | IL17a | Ko04657 | 4.56870 | 0.001049 |
| 116472 | Up-to-down | IL17b | Ko04657 | 1.52430 | 1.818E-09 |
| 29513 | Up-to-down | Mapk13 | Ko04657 | 2.51562 | 1.618E-34 |
| 286997 | Up-to-down | Mapk15 | Ko04657 | 5.54561 | 1.059E-68 |
| 170496 | Up-to-down | Lcn2 | Ko04657 | 1.40723 | 2.854E-114 |
| 245920 | Up-to-down | Cxcl10 | Ko04657 | 1.10146 | 1.436E-21 |
| 288478 | Up-to-down | Rsph10b | Ko04657 | 5.55190 | 2.333E-233 |
| 29397 | Up-to-down | Ccl11 | Ko04657 | 1.28576 | 3.759E-10 |
| 307721 | Up-to-down | Irx3 | Ko04657 | 1.39877 | 1.443E-12 |
| 29538 | Up-to-down | Ccl20 | Ko04657 | 3.81381 | 5.056E-09 |
These genes were highly expressed in the AF group and significantly down-regulated after drug intervention.