| Literature DB >> 33484862 |
C Serre-Miranda1, C Nobrega1, S Roque1, J Canto-Gomes1, C S Silva1, N Vieira1, P Barreira-Silva1, P Alves-Peixoto1, J Cotter2, A Reis3, M Formigo3, H Sarmento3, O Pires4, A Carvalho5, D Y Petrovykh6, L Diéguez6, J C Sousa1, N Sousa7, C Capela5, J A Palha7, P G Cunha2, M Correia-Neves8.
Abstract
BACKGROUND: Commercial availability of serological tests to evaluate immunoglobulins (Ig) targeting severe acute respiratory syndrome coronavirus-2 (SARS-CoV-2) has grown exponentially since the start of the coronavirus disease 2019 (COVID-19) outbreak. Thorough validation of these tests is important before use as epidemiological tools to infer seroprevalence in specific populations and as diagnostic tools to complement molecular approaches (e.g., quantitative reverse transcription-polymerase chain reaction).Entities:
Keywords: COVID-19; Clinical presentation; Qualitative and semiquantitative tests; Sensitivity; Serological tests; Specificity
Mesh:
Year: 2021 PMID: 33484862 PMCID: PMC7817432 DOI: 10.1016/j.ijid.2021.01.038
Source DB: PubMed Journal: Int J Infect Dis ISSN: 1201-9712 Impact factor: 3.623
Clinical and demographic characterisation of the cohort.
| COVID-19 patients | Pre-COVID-19 controls | ||||
|---|---|---|---|---|---|
| All | Clinical presentation | Healthy controls | HIV and other viral infections | ||
| Severe | Non-severe | ||||
| n | 89 | 32 | 57 | 25 | 11 |
| Age (years), Median [min;max] | 71 [30;96] | 75 [45;96] | 67 [30;94] | 71 [59;80] | 57 [33;72] |
| Female, n (%) | 51 (57.3) | 16 (50.0) | 35 (61.4) | 13 (52.0) | 3 (27.3) |
| Hypertension, n (%) | 59 (66.3) | 25 (78.1) | 34 (59.6) | n/a | n/a |
| Diabetes, n (%) | 27 (30.3) | 11 (34.4) | 16 (28.1) | n/a | n/a |
| Obesity, n (%) | 13 (14.6) | 4 (12.5) | 9 (15.8) | n/a | n/a |
| Neoplasia, n (%) | 8 (9.0) | 4 (12.5) | 4 (7.0) | n/a | n/a |
| Autoimmune disease, n (%) | 5 (5.6) | 2 (6.3) | 3 (5.3) | n/a | n/a |
| Active smokers, n (%) | 2 (2.2) | 0 (0.0) | 2 (3.5) | n/a | n/a |
| Corticosteroids (during hospitalization), n (%) | 6 (6.7) | 3 (9.4) | 3 (5.3) | n/a | n/a |
| Other immunosuppressive drugs, n (%) | |||||
| Prior to hospitalization | 5 (5.6) | 3 (9.4) | 2 (3.5) | n/a | n/a |
| During hospitalization | 1 (1.1) | 1 (3.1) | 0 (0.0) | n/a | n/a |
n/a, not applicable.
Please see “Study Population” section on Methods. No differences between groups were observed in the percentages of the clinical conditions, as assessed by the Fisher Exact Probability test.
Obesity defined as body mass index over 30 kg/m2.
Assayed commercial tests to detect immunoglobulins specific for SARS-CoV-2 infection.
| Assay | Supplier | Product | Catalog no. | Technology | Format | Assay Target | Obs |
|---|---|---|---|---|---|---|---|
| Semiquantitative assays | SARS-coV-2 IgG assay | 06R86 | CLIA | IgG | N protein | Requires an Abbott Architect i2000 | |
| anti SARS-CoV-2 | EI 2606-9601 G | ELISA | IgG | S1 protein | Requires a regular absorbance microplate reader | ||
| anti SARS-CoV-2 | EI 2606-9601 A | ELISA | IgA | ||||
| MAGLUMI® 2019-nCoV (SARS-CoV-2) | 130219016M | CLIA | IgM | S antigen and N protein | Requires a MAGLUMI chemiluminescence immunoassay system | ||
| MAGLUMI® 2019-nCoV (SARS-CoV-2) | 130219015M | CLIA | IgG | ||||
| Qualitative assays | qSARS-Cov-2 IgG/IgM Cassette Rapid Test | WI5513C | LFIA | IgM/IgG | N and S Proteins | – | |
| One step test for novel coronavirus (2019-nCoV) IgM/IgG antibody (colloidal gold) | CG2057 | LFIA | Total Ig | N and S Proteins | – | ||
| 2019-nCoV Ab test (colloidal gold), IgM/IgG whole blood/Serum/Plasma Combo | n/a | LFIA | IgM/IgG | N and S Proteins | – | ||
| StrongStep® SARS-CoV-2 IgM/IgG Test | 502090 | LFIA | IgM/IgG | Not specified | Extremely faint bands. | ||
| SARS-CoV-2 antibody test | K-20-RC-CoV-2 | LFIA | IgM/IgG | Not specified | – | ||
| Rapid IgM-IgG Combined Antibody Test kit for SARS-CoV-2 (ICA) | n/a | LFIA | IgM/IgG | Not specified | – | ||
| COVID-19 IgM & IgG Test (immunocromatography) | 3.2.01.0.1701 | LFIA | IgM/IgG | Not specified | – | ||
| Standard Q COVID-19 IgM/IgG Duo Test | Q-NCOV-01D | LFIA | IgM/IgG | N Protein | – |
CLIA; Chemiluminescence Immunoassay; ELISA: Enzyme Linked Immuno-Sorbent Assay; Ig: Immunoglobulin; LFIA: Lateral Flow Immunoassay; n/a: not available; N: Nucleocapsid; S: Spike.
Sensitivity and specificity of the assayed tests to detect immunoglobulins specific for SARS-CoV-2 infection. Sensitivity was evaluated in COVID-19 patients upon stratification by days since symptoms onset. Each colour gradient refers to higher (darker) towards lower (lighter) values of specificity (yellow) or sensitivity (green).
Negative and positive predictive values (PPV and NPV, respectively) of assayed commercial tests to detect immunoglobulins specific for SARS-CoV-2 infection. PPV and NPV are adjusted for different population prevalence scenarios (3%, 50% and 95%), as described in the “Data analysis” section of material and methods. Each colour gradient refers to higher (darker) towards lower (lighter) values of NPV (blue) or PPV (grey).
Cohen’s kappa coefficient for the strength of agreement between assayed tests to detect immunoglobulins specific for SARS-CoV-2 infection. Colour gradient refers to higher (darker) towards lower (lighter) values Cohen’s kappa coefficient (purple).
Figure 1Receiver operator characteristic (ROC) curves of the assayed semiquantitative tests. AUC: Area Under the Curve. Ig: Immunoglobulin.
Figure 2Comparison of the Ig levels in patients with a severe and non-severe clinical presentation using the semiquantitative tests Abbott, Euroimmun and Snibe. Each dot represents one sample and the solid thick lines correspond to the group’s median. Solid thin lines represent each test’s cut-off value. In the case of Euroimmun test, the shadowed grey banner refers to borderline values according to the manufacturer (between 0.8 and 1.1). Since the y-axis has a log scale that does not allow the representation of zero, in those situations (Snibe IgG and IgM) arbitrary values were attributed, and a dashed grey line was represented in this value. For values above the detection limit (Euroimmun IgA), a random value of 20 was attributed and represented as a dashed grey line. Groups median were compared using a Mann–Whitney U-tests; significant differences were represented as: * for P < 0.05; ** for P < 0.01; ***, P < 0.001.