Literature DB >> 33484123

Optimizing a literature surveillance strategy to retrieve sound overall prognosis and risk assessment model papers.

Patricia L Kavanagh1,2, Francine Frater1, Tamara Navarro3, Peter LaVita1, Rick Parrish3, Alfonso Iorio3,4.   

Abstract

OBJECTIVE: Our aim was to develop an efficient search strategy for prognostic studies and clinical prediction guides (CPGs), optimally balancing sensitivity and precision while independent of MeSH terms, as relying on them may miss the most current literature.
MATERIALS AND METHODS: We combined 2 Hedges-based search strategies, modified to remove MeSH terms for overall prognostic studies and CPGs, and ran the search on 269 journals. We read abstracts from a random subset of retrieved references until ≥ 20 per journal were reviewed and classified them as positive when fulfilling standardized quality criteria, thereby assembling a standard dataset used to calibrate the search strategy. We determined performance characteristics of our new search strategy against the Hedges standard and performance characteristics of published search strategies against the standard dataset.
RESULTS: Our search strategy retrieved 16 089 references from 269 journals during our study period. One hundred fifty-four journals yielded ≥ 20 references and ≥ 1 prognostic study or CPG. Against the Hedges standard, the new search strategy had sensitivity/specificity/precision/accuracy of 84%/80%/2%/80%, respectively. Existing published strategies tested against our standard dataset had sensitivities of 36%-94% and precision of 5%-10%. DISCUSSION: We developed a new search strategy to identify overall prognosis studies and CPGs independent of MeSH terms. These studies are important for medical decision-making, as they identify specific populations and individuals who may benefit from interventions.
CONCLUSION: Our results may benefit literature surveillance and clinical guideline efforts, as our search strategy performs as well as published search strategies while capturing literature at the time of publication.
© The Author(s) 2021. Published by Oxford University Press on behalf of the American Medical Informatics Association. All rights reserved. For permissions, please email: journals.permissions@oup.com.

Entities:  

Keywords:  literature search; prognosis; search strategy; sensitivity; specificity; updating

Mesh:

Year:  2021        PMID: 33484123      PMCID: PMC7973466          DOI: 10.1093/jamia/ocaa232

Source DB:  PubMed          Journal:  J Am Med Inform Assoc        ISSN: 1067-5027            Impact factor:   4.497


  51 in total

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6.  Transparent Reporting of a multivariable prediction model for Individual Prognosis or Diagnosis (TRIPOD): explanation and elaboration.

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Journal:  Ann Intern Med       Date:  2015-01-06       Impact factor: 25.391

7.  Optimal search strategies for identifying sound clinical prediction studies in EMBASE.

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Review 8.  Living systematic reviews: 4. Living guideline recommendations.

Authors:  Elie A Akl; Joerg J Meerpohl; Julian Elliott; Lara A Kahale; Holger J Schünemann
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10.  Updated clinical guidelines experience major reporting limitations.

Authors:  Robin W M Vernooij; Laura Martínez García; Ivan Dario Florez; Laura Hidalgo Armas; Michiel H F Poorthuis; Melissa Brouwers; Pablo Alonso-Coello
Journal:  Implement Sci       Date:  2017-10-12       Impact factor: 7.327

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  1 in total

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  1 in total

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