Literature DB >> 33483510

An integrative multiomic network model links lipid metabolism to glucose regulation in coronary artery disease.

Ariella T Cohain1, William T Barrington2, Daniel M Jordan1,3, Johan L M Bjorkegren4,5, Eric E Schadt6,7, Noam D Beckmann1, Carmen A Argmann1, Sander M Houten1, Alexander W Charney1,8, Raili Ermel9, Katyayani Sukhavasi9, Oscar Franzen10, Simon Koplev1, Carl Whatling11, Gillian M Belbin1,3, Jialiang Yang1, Ke Hao1, Eimear E Kenny1,3, Zhidong Tu1, Jun Zhu1, Li-Ming Gan12, Ron Do1,3, Chiara Giannarelli1,13, Jason C Kovacic13, Arno Ruusalepp9, Aldons J Lusis2.   

Abstract

Elevated plasma cholesterol and type 2 diabetes (T2D) are associated with coronary artery disease (CAD). Individuals treated with cholesterol-lowering statins have increased T2D risk, while individuals with hypercholesterolemia have reduced T2D risk. We explore the relationship between lipid and glucose control by constructing network models from the STARNET study with sequencing data from seven cardiometabolic tissues obtained from CAD patients during coronary artery by-pass grafting surgery. By integrating gene expression, genotype, metabolomic, and clinical data, we identify a glucose and lipid determining (GLD) regulatory network showing inverse relationships with lipid and glucose traits. Master regulators of the GLD network also impact lipid and glucose levels in inverse directions. Experimental inhibition of one of the GLD network master regulators, lanosterol synthase (LSS), in mice confirms the inverse relationships to glucose and lipid levels as predicted by our model and provides mechanistic insights.

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Year:  2021        PMID: 33483510      PMCID: PMC7822923          DOI: 10.1038/s41467-020-20750-8

Source DB:  PubMed          Journal:  Nat Commun        ISSN: 2041-1723            Impact factor:   14.919


  69 in total

1.  An integrative genomics approach to infer causal associations between gene expression and disease.

Authors:  Eric E Schadt; John Lamb; Xia Yang; Jun Zhu; Steve Edwards; Debraj Guhathakurta; Solveig K Sieberts; Stephanie Monks; Marc Reitman; Chunsheng Zhang; Pek Yee Lum; Amy Leonardson; Rolf Thieringer; Joseph M Metzger; Liming Yang; John Castle; Haoyuan Zhu; Shera F Kash; Thomas A Drake; Alan Sachs; Aldons J Lusis
Journal:  Nat Genet       Date:  2005-06-19       Impact factor: 38.330

2.  Association between familial hypercholesterolemia and prevalence of type 2 diabetes mellitus.

Authors:  Joost Besseling; John J P Kastelein; Joep C Defesche; Barbara A Hutten; G Kees Hovingh
Journal:  JAMA       Date:  2015-03-10       Impact factor: 56.272

3.  Decreased plasma cholesterol and hypersensitivity to statins in mice lacking Pcsk9.

Authors:  Shirya Rashid; David E Curtis; Rita Garuti; Norma N Anderson; Yuriy Bashmakov; Y K Ho; Robert E Hammer; Young-Ah Moon; Jay D Horton
Journal:  Proc Natl Acad Sci U S A       Date:  2005-04-01       Impact factor: 11.205

4.  Insig-mediated degradation of HMG CoA reductase stimulated by lanosterol, an intermediate in the synthesis of cholesterol.

Authors:  Bao-Liang Song; Norman B Javitt; Russell A DeBose-Boyd
Journal:  Cell Metab       Date:  2005-03       Impact factor: 27.287

5.  Alterations of a Cellular Cholesterol Metabolism Network Are a Molecular Feature of Obesity-Related Type 2 Diabetes and Cardiovascular Disease.

Authors:  Jingzhong Ding; Lindsay M Reynolds; Tanja Zeller; Christian Müller; Kurt Lohman; Barbara J Nicklas; Stephen B Kritchevsky; Zhiqing Huang; Alberto de la Fuente; Nicola Soranzo; Robert E Settlage; Chia-Chi Chuang; Timothy Howard; Ning Xu; Mark O Goodarzi; Y-D Ida Chen; Jerome I Rotter; David S Siscovick; John S Parks; Susan Murphy; David R Jacobs; Wendy Post; Russell P Tracy; Philipp S Wild; Stefan Blankenberg; Ina Hoeschele; David Herrington; Charles E McCall; Yongmei Liu
Journal:  Diabetes       Date:  2015-07-07       Impact factor: 9.461

6.  Cardiovascular benefits and diabetes risks of statin therapy in primary prevention: an analysis from the JUPITER trial.

Authors:  Paul M Ridker; Aruna Pradhan; Jean G MacFadyen; Peter Libby; Robert J Glynn
Journal:  Lancet       Date:  2012-08-11       Impact factor: 79.321

7.  Integrating siRNA and protein-protein interaction data to identify an expanded insulin signaling network.

Authors:  Zhidong Tu; Carmen Argmann; Kenny K Wong; Lyndon J Mitnaul; Stephen Edwards; Iliana C Sach; Jun Zhu; Eric E Schadt
Journal:  Genome Res       Date:  2009-03-04       Impact factor: 9.043

8.  Changes in plaque lipid content after short-term intensive versus standard statin therapy: the YELLOW trial (reduction in yellow plaque by aggressive lipid-lowering therapy).

Authors:  Annapoorna S Kini; Usman Baber; Jason C Kovacic; Atul Limaye; Ziad A Ali; Joseph Sweeny; Akiko Maehara; Roxana Mehran; George Dangas; Gary S Mintz; Valentin Fuster; Jagat Narula; Samin K Sharma; Pedro R Moreno
Journal:  J Am Coll Cardiol       Date:  2013-05-01       Impact factor: 24.094

9.  A genome-wide approach accounting for body mass index identifies genetic variants influencing fasting glycemic traits and insulin resistance.

Authors:  Alisa K Manning; Marie-France Hivert; Robert A Scott; Jonna L Grimsby; Nabila Bouatia-Naji; Han Chen; Denis Rybin; Ching-Ti Liu; Lawrence F Bielak; Inga Prokopenko; Najaf Amin; Daniel Barnes; Gemma Cadby; Jouke-Jan Hottenga; Erik Ingelsson; Anne U Jackson; Toby Johnson; Stavroula Kanoni; Claes Ladenvall; Vasiliki Lagou; Jari Lahti; Cecile Lecoeur; Yongmei Liu; Maria Teresa Martinez-Larrad; May E Montasser; Pau Navarro; John R B Perry; Laura J Rasmussen-Torvik; Perttu Salo; Naveed Sattar; Dmitry Shungin; Rona J Strawbridge; Toshiko Tanaka; Cornelia M van Duijn; Ping An; Mariza de Andrade; Jeanette S Andrews; Thor Aspelund; Mustafa Atalay; Yurii Aulchenko; Beverley Balkau; Stefania Bandinelli; Jacques S Beckmann; John P Beilby; Claire Bellis; Richard N Bergman; John Blangero; Mladen Boban; Michael Boehnke; Eric Boerwinkle; Lori L Bonnycastle; Dorret I Boomsma; Ingrid B Borecki; Yvonne Böttcher; Claude Bouchard; Eric Brunner; Danijela Budimir; Harry Campbell; Olga Carlson; Peter S Chines; Robert Clarke; Francis S Collins; Arturo Corbatón-Anchuelo; David Couper; Ulf de Faire; George V Dedoussis; Panos Deloukas; Maria Dimitriou; Josephine M Egan; Gudny Eiriksdottir; Michael R Erdos; Johan G Eriksson; Elodie Eury; Luigi Ferrucci; Ian Ford; Nita G Forouhi; Caroline S Fox; Maria Grazia Franzosi; Paul W Franks; Timothy M Frayling; Philippe Froguel; Pilar Galan; Eco de Geus; Bruna Gigante; Nicole L Glazer; Anuj Goel; Leif Groop; Vilmundur Gudnason; Göran Hallmans; Anders Hamsten; Ola Hansson; Tamara B Harris; Caroline Hayward; Simon Heath; Serge Hercberg; Andrew A Hicks; Aroon Hingorani; Albert Hofman; Jennie Hui; Joseph Hung; Marjo-Riitta Jarvelin; Min A Jhun; Paul C D Johnson; J Wouter Jukema; Antti Jula; W H Kao; Jaakko Kaprio; Sharon L R Kardia; Sirkka Keinanen-Kiukaanniemi; Mika Kivimaki; Ivana Kolcic; Peter Kovacs; Meena Kumari; Johanna Kuusisto; Kirsten Ohm Kyvik; Markku Laakso; Timo Lakka; Lars Lannfelt; G Mark Lathrop; Lenore J Launer; Karin Leander; Guo Li; Lars Lind; Jaana Lindstrom; Stéphane Lobbens; Ruth J F Loos; Jian'an Luan; Valeriya Lyssenko; Reedik Mägi; Patrik K E Magnusson; Michael Marmot; Pierre Meneton; Karen L Mohlke; Vincent Mooser; Mario A Morken; Iva Miljkovic; Narisu Narisu; Jeff O'Connell; Ken K Ong; Ben A Oostra; Lyle J Palmer; Aarno Palotie; James S Pankow; John F Peden; Nancy L Pedersen; Marina Pehlic; Leena Peltonen; Brenda Penninx; Marijana Pericic; Markus Perola; Louis Perusse; Patricia A Peyser; Ozren Polasek; Peter P Pramstaller; Michael A Province; Katri Räikkönen; Rainer Rauramaa; Emil Rehnberg; Ken Rice; Jerome I Rotter; Igor Rudan; Aimo Ruokonen; Timo Saaristo; Maria Sabater-Lleal; Veikko Salomaa; David B Savage; Richa Saxena; Peter Schwarz; Udo Seedorf; Bengt Sennblad; Manuel Serrano-Rios; Alan R Shuldiner; Eric J G Sijbrands; David S Siscovick; Johannes H Smit; Kerrin S Small; Nicholas L Smith; Albert Vernon Smith; Alena Stančáková; Kathleen Stirrups; Michael Stumvoll; Yan V Sun; Amy J Swift; Anke Tönjes; Jaakko Tuomilehto; Stella Trompet; Andre G Uitterlinden; Matti Uusitupa; Max Vikström; Veronique Vitart; Marie-Claude Vohl; Benjamin F Voight; Peter Vollenweider; Gerard Waeber; Dawn M Waterworth; Hugh Watkins; Eleanor Wheeler; Elisabeth Widen; Sarah H Wild; Sara M Willems; Gonneke Willemsen; James F Wilson; Jacqueline C M Witteman; Alan F Wright; Hanieh Yaghootkar; Diana Zelenika; Tatijana Zemunik; Lina Zgaga; Nicholas J Wareham; Mark I McCarthy; Ines Barroso; Richard M Watanabe; Jose C Florez; Josée Dupuis; James B Meigs; Claudia Langenberg
Journal:  Nat Genet       Date:  2012-05-13       Impact factor: 38.330

10.  Host-microbe interactions have shaped the genetic architecture of inflammatory bowel disease.

Authors:  Luke Jostins; Stephan Ripke; Rinse K Weersma; Richard H Duerr; Dermot P McGovern; Ken Y Hui; James C Lee; L Philip Schumm; Yashoda Sharma; Carl A Anderson; Jonah Essers; Mitja Mitrovic; Kaida Ning; Isabelle Cleynen; Emilie Theatre; Sarah L Spain; Soumya Raychaudhuri; Philippe Goyette; Zhi Wei; Clara Abraham; Jean-Paul Achkar; Tariq Ahmad; Leila Amininejad; Ashwin N Ananthakrishnan; Vibeke Andersen; Jane M Andrews; Leonard Baidoo; Tobias Balschun; Peter A Bampton; Alain Bitton; Gabrielle Boucher; Stephan Brand; Carsten Büning; Ariella Cohain; Sven Cichon; Mauro D'Amato; Dirk De Jong; Kathy L Devaney; Marla Dubinsky; Cathryn Edwards; David Ellinghaus; Lynnette R Ferguson; Denis Franchimont; Karin Fransen; Richard Gearry; Michel Georges; Christian Gieger; Jürgen Glas; Talin Haritunians; Ailsa Hart; Chris Hawkey; Matija Hedl; Xinli Hu; Tom H Karlsen; Limas Kupcinskas; Subra Kugathasan; Anna Latiano; Debby Laukens; Ian C Lawrance; Charlie W Lees; Edouard Louis; Gillian Mahy; John Mansfield; Angharad R Morgan; Craig Mowat; William Newman; Orazio Palmieri; Cyriel Y Ponsioen; Uros Potocnik; Natalie J Prescott; Miguel Regueiro; Jerome I Rotter; Richard K Russell; Jeremy D Sanderson; Miquel Sans; Jack Satsangi; Stefan Schreiber; Lisa A Simms; Jurgita Sventoraityte; Stephan R Targan; Kent D Taylor; Mark Tremelling; Hein W Verspaget; Martine De Vos; Cisca Wijmenga; David C Wilson; Juliane Winkelmann; Ramnik J Xavier; Sebastian Zeissig; Bin Zhang; Clarence K Zhang; Hongyu Zhao; Mark S Silverberg; Vito Annese; Hakon Hakonarson; Steven R Brant; Graham Radford-Smith; Christopher G Mathew; John D Rioux; Eric E Schadt; Mark J Daly; Andre Franke; Miles Parkes; Severine Vermeire; Jeffrey C Barrett; Judy H Cho
Journal:  Nature       Date:  2012-11-01       Impact factor: 49.962

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  10 in total

1.  Integrative Prioritization of Causal Genes for Coronary Artery Disease.

Authors:  Ke Hao; Raili Ermel; Katyayani Sukhavasi; Haoxiang Cheng; Lijiang Ma; Ling Li; Letizia Amadori; Simon Koplev; Oscar Franzén; Valentina d'Escamard; Nirupama Chandel; Kathryn Wolhuter; Nicole S Bryce; Vamsidhar R M Venkata; Clint L Miller; Arno Ruusalepp; Heribert Schunkert; Johan L M Björkegren; Jason C Kovacic
Journal:  Circ Genom Precis Med       Date:  2021-12-28

2.  Obesity Partially Mediates the Diabetogenic Effect of Lowering LDL Cholesterol.

Authors:  Peitao Wu; Jee-Young Moon; Iyas Daghlas; Giulianini Franco; Bianca C Porneala; Fariba Ahmadizar; Tom G Richardson; Jonas L Isaksen; Georgy Hindy; Jie Yao; Colleen M Sitlani; Laura M Raffield; Lisa R Yanek; Mary F Feitosa; Rafael R C Cuadrat; Qibin Qi; M Arfan Ikram; Christina Ellervik; Ulrika Ericson; Mark O Goodarzi; Jennifer A Brody; Leslie Lange; Josep M Mercader; Dhananjay Vaidya; Ping An; Matthias B Schulze; Lluis Masana; Mohsen Ghanbari; Morten S Olesen; Jianwen Cai; Xiuqing Guo; James S Floyd; Susanne Jäger; Michael A Province; Rita R Kalyani; Bruce M Psaty; Marju Orho-Melander; Paul M Ridker; Jørgen K Kanters; Andre Uitterlinden; George Davey Smith; Dipender Gill; Robert C Kaplan; Maryam Kavousi; Sridharan Raghavan; Daniel I Chasman; Jerome I Rotter; James B Meigs; Jose C Florez; Josée Dupuis; Ching-Ti Liu; Jordi Merino
Journal:  Diabetes Care       Date:  2022-01-01       Impact factor: 17.152

Review 3.  Connections for Matters of the Heart: Network Medicine in Cardiovascular Diseases.

Authors:  Abhijeet Rajendra Sonawane; Elena Aikawa; Masanori Aikawa
Journal:  Front Cardiovasc Med       Date:  2022-05-19

4.  Metabonomic Characteristics of Myocardial Diastolic Dysfunction in Type 2 Diabetic Cardiomyopathy Patients.

Authors:  Mingyu Hao; Jianxin Deng; Xiaohong Huang; Haiyan Li; Huiting Ou; Xiangsheng Cai; Jiajie She; Xueting Liu; Ling Chen; Shujuan Chen; Wenlan Liu; Dewen Yan
Journal:  Front Physiol       Date:  2022-05-09       Impact factor: 4.755

Review 5.  Precision Medicine Approaches to Vascular Disease: JACC Focus Seminar 2/5.

Authors:  Clint L Miller; Amy R Kontorovich; Ke Hao; Lijiang Ma; Conrad Iyegbe; Johan L M Björkegren; Jason C Kovacic
Journal:  J Am Coll Cardiol       Date:  2021-05-25       Impact factor: 24.094

6.  A Molecular network approach reveals shared cellular and molecular signatures between chronic fatigue syndrome and other fatiguing illnesses.

Authors:  Phillip H Comella; Edgar Gonzalez-Kozlova; Roman Kosoy; Alexander W Charney; Irene Font Peradejordi; Shreya Chandrasekar; Scott R Tyler; Wenhui Wang; Bojan Losic; Jun Zhu; Gabriel E Hoffman; Seunghee Kim-Schulze; Jingjing Qi; Manishkumar Patel; Andrew Kasarskis; Mayte Suarez-Farinas; Zeynep H Gümüş; Carmen Argmann; Miriam Merad; Christian Becker; Noam D Beckmann; Eric E Schadt
Journal:  medRxiv       Date:  2021-02-02

Review 7.  Hepatocellular Carcinoma and Obesity, Type 2 Diabetes Mellitus, Cardiovascular Disease: Causing Factors, Molecular Links, and Treatment Options.

Authors:  Chunye Zhang; Shuai Liu; Ming Yang
Journal:  Front Endocrinol (Lausanne)       Date:  2021-12-23       Impact factor: 5.555

Review 8.  Aberrant branched-chain amino acid catabolism in cardiovascular diseases.

Authors:  Yixiao Xiong; Ling Jiang; Tao Li
Journal:  Front Cardiovasc Med       Date:  2022-07-15

9.  TRPM2, PDLIM5, BCL3, CD14, GBA Genes as Feasible Markers for Premature Coronary Heart Disease Risk.

Authors:  Kriengchai Prasongsukarn; Wilanee Dechkhajorn; Surachet Benjathummarak; Yaowapa Maneerat
Journal:  Front Genet       Date:  2021-05-20       Impact factor: 4.599

10.  Detection of an anti-angina therapeutic module in the effective population treated by a multi-target drug Danhong injection: a randomized trial.

Authors:  Jun Liu; Dan-Dan Li; Wei Dong; Yu-Qi Liu; Yang Wu; Da-Xuan Tang; Fu-Chun Zhang; Meng Qiu; Qi Hua; Jing-Yu He; Jun Li; Bai Du; Ting-Hai Du; Lin-Lin Niu; Xue-Jun Jiang; Bo Cui; Jiang-Bin Chen; Yang-Gan Wang; Hai-Rong Wang; Qin Yu; Jing He; Yi-Lin Mao; Xiao-Fang Bin; Yue Deng; Yu-Dan Tian; Qing-Hua Han; Da-Jin Liu; Li-Qin Duan; Ming-Jun Zhao; Cui-Ying Zhang; Hai-Ying Dai; Ze-Hua Li; Ying Xiao; You-Zhi Hu; Xiao-Yu Huang; Kun Xing; Xin Jiang; Chao-Feng Liu; Jing An; Feng-Chun Li; Tao Tao; Jin-Fa Jiang; Ying Yang; Yao-Rong Dong; Lei Zhang; Guang Fu; Ying Li; Shu-Wei Huang; Li-Ping Dou; Lan-Jun Sun; Ying-Qiang Zhao; Jie Li; Yun Xia; Jun Liu; Fan Liu; Wen-Jin He; Ying Li; Jian-Cong Tan; Yang Lin; Ya-Bin Zhou; Jian-Fei Yang; Guo-Qing Ma; Hui-Jun Chen; He-Ping Liu; Zong-Wu Liu; Jian-Xiong Liu; Xiao-Jia Luo; Xiao-Hong Bin; Ya-Nan Yu; Hai-Xia Dang; Bing Li; Fei Teng; Wang-Min Qiao; Xiao-Long Zhu; Bing-Wei Chen; Qi-Guang Chen; Chun-Ti Shen; Yong-Yan Wang; Yun-Dai Chen; Zhong Wang
Journal:  Signal Transduct Target Ther       Date:  2021-09-01
  10 in total

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