Literature DB >> 33482624

Correlation between polymerase chain reaction (PCR) examination rate among the population and the containment of the COVID-19 pandemic.

M Sonoo1, T Kanbayashi2, M Idogawa3, T Shimohata4, H Hayashi5.   

Abstract

Entities:  

Year:  2020        PMID: 33482624      PMCID: PMC7245269          DOI: 10.1016/j.puhe.2020.05.027

Source DB:  PubMed          Journal:  Public Health        ISSN: 0033-3506            Impact factor:   2.427


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The coronavirus disease 2019 (COVID-19) pandemic is now a worldwide peril, and its control is an emergent issue. Expansion of polymerase chain reaction (PCR) tests is generally believed to be the most important key for containing the infection, together with social distancing. However, the relation between examination rate and the success of containment has not been directly studied to our knowledge. We investigated this issue based on the open data at websites. , The rate of PCR tests among population (named as examination rate; ER) was extracted from a website for countries having more than 1000 cases. To evaluate the success of containment, the latest value of the new cases per one million population during 7 days in the trajectory analysis , was divided by its highest value and was named as the containment ratio (CR). We postulated that strict compliance to social distancing is better achieved in advanced countries, and therefore, Gross Domestic Product per capita (hereafter GDP) of each country was adopted as another predictor variable. Countries lacking some data were excluded. For instance, China was not included because ER is not known. The correlation between CR and ER/GDP was investigated by simple and multiple regressions/correlations. All statistical calculation was performed using Microsoft Excel for Macintosh. Included were 90 countries. Individual countries are plotted in Fig. 1 using logarithmic scales for every parameter. Notable countries are marked. As results, CR was negatively correlated both with ER (r = −0.423, P < 0.0001) and GDP (r = −0.483, P < 0.00001). In multiple regression, P-values of partial regression coefficients were 0.336 for ER and 0.009 for GDP, only the latter was significant. In other word, although CR was negatively correlated with ER, this was thought to be due to the confounding effect with GDP (ER and GDP were highly correlated, r = 0.752). Accordingly, it is concluded that CR is explained by GDP alone.
Fig. 1

Relation between containment ratio (CR) vs. examination rate (ER) or GDP. A: CR vs. ER. B: CR vs. GDP. Notable countries are marked. GDP was acquired from https://www.globalnote.jp/p-data-g/?dno=8870&post_no=1339 [Accessed 1 May 2020]. Abbreviations: GDP, Gross Domestic Product per capita.

Relation between containment ratio (CR) vs. examination rate (ER) or GDP. A: CR vs. ER. B: CR vs. GDP. Notable countries are marked. GDP was acquired from https://www.globalnote.jp/p-data-g/?dno=8870&post_no=1339 [Accessed 1 May 2020]. Abbreviations: GDP, Gross Domestic Product per capita. Close inspection of individual countries reveals several interesting facts. Countries with the three highest ER in the world are Iceland, the UAE, and Bahrain. Iceland achieved the world's best containment, but in the UAE and Bahrain, the pandemic is not at all controlled. This may be related to large population of foreign workers in these countries. Three Southeast Asian countries, Thailand, Malaysia and Singapore, having similar climate and economical states (blue marks in Figure) show a ‘positive’ correlation, i.e., opposite to the general tendency. Singapore achieved very high ER (3.8%) among Asian countries, but the CR remains high. This may be related to the fact that Singapore government discouraged healthy people to wear a mask until early April. However, this strategy may not have been so bad since attenuation of virulence is reported in Singapore, and our analysis predicted the lowest infection fatal rate (0.008%) in the world in Singapore (unpublished results). The good result of Thailand may be due to prompt and intensive preventive measures including lockdown. Japan is criticized by its very low ER (0.19%), but when compared with major Western countries in the Northern Hemisphere generally achieving 2–7% ER, its CR is almost similar to countries that achieved fairly good containment (France, Spain, Germany, Italy), and is much better than UK, USA or Sweden. These results imply that the social distancing is the largest factor to achieve containment, and the contribution of broad PCR tests is smaller.

Acknowledgement

The authors would like to thank Dr. Katsuhisa Ogata, Department of Neurology, Higashisaitama National Hospital, for the information on world countries.
  3 in total

1.  Estimation of the true infection rate and infection fatality rate of coronavirus disease 2019 in each country.

Authors:  Masahiro Sonoo; Takamichi Kanbayashi; Takayoshi Shimohata; Masahito Kobayashi; Masashi Idogawa; Hideyuki Hayashi
Journal:  J Infect Public Health       Date:  2021-12-24       Impact factor: 3.718

2.  Multiscaled causality of infections on viral testing volumes: The case of COVID-19 in Tunisia.

Authors:  Foued Saâdaoui; Hana Rabbouch; Hayet Saadaoui; Frédéric Dutheil
Journal:  Int J Health Plann Manage       Date:  2022-02-12

3.  Is There Any Relationship Between the Number of COVID-19 Tests by Country with the Income Inequality of Countries? A Comparison with Income Inequality Metrics.

Authors:  Necati Çıtak; Atilla Pekçolaklar
Journal:  Turk Thorac J       Date:  2022-03
  3 in total

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