Literature DB >> 33481228

Simultaneous Detection of Phosphoinositide Lipids by Radioactive Metabolic Labeling.

Noah Steinfeld1,2, Sai Srinivas Panapakkam Giridharan1, Emily J Kauffman1, Lois S Weisman3,4.   

Abstract

Phosphoinositide (PPI) lipids are a crucial class of low-abundance signaling molecules that regulate many processes within cells. Methods that enable simultaneous detection of all PPI lipid species provide a wholistic snapshot of the PPI profile of cells, which is critical for probing PPI biology. Here we describe a method for the simultaneous measurement of cellular PPI levels by metabolically labeling yeast or mammalian cells with myo-3H-inositol, extracting radiolabeled glycerophosphoinositides, and separating lipid species on an anion exchange column via HPLC.

Entities:  

Keywords:  PI3,4,5P3; PI3,4P2; PI3,5P2; PI3P; PI4,5P2; PI4P; PI5P; Phosphatidylinositol; Phosphoinositide lipids; PtdIns; Radioactive metabolic labeling

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Year:  2021        PMID: 33481228      PMCID: PMC8059495          DOI: 10.1007/978-1-0716-1142-5_1

Source DB:  PubMed          Journal:  Methods Mol Biol        ISSN: 1064-3745


  26 in total

1.  A rapid method of total lipid extraction and purification.

Authors:  E G BLIGH; W J DYER
Journal:  Can J Biochem Physiol       Date:  1959-08

2.  Metabolic Labeling of Inositol Phosphates and Phosphatidylinositols in Yeast and Mammalian Cells.

Authors:  Andrew T Hale; Bradley P Clarke; John D York
Journal:  Methods Mol Biol       Date:  2020

3.  Plentiful PtdIns5P from scanty PtdIns(3,5)P2 or from ample PtdIns? PIKfyve-dependent models: Evidence and speculation (response to: DOI 10.1002/bies.201300012).

Authors:  Assia Shisheva; Diego Sbrissa; Ognian Ikonomov
Journal:  Bioessays       Date:  2014-11-18       Impact factor: 4.345

Review 4.  Understanding phosphoinositides: rare, dynamic, and essential membrane phospholipids.

Authors:  Eamonn J Dickson; Bertil Hille
Journal:  Biochem J       Date:  2019-01-07       Impact factor: 3.857

5.  Phosphoinositide 5-phosphatase Fig 4p is required for both acute rise and subsequent fall in stress-induced phosphatidylinositol 3,5-bisphosphate levels.

Authors:  Jason E Duex; Johnathan J Nau; Emily J Kauffman; Lois S Weisman
Journal:  Eukaryot Cell       Date:  2006-04

6.  Thrombin-induced phosphodiesteratic cleavage of phosphatidylinositol bisphosphate in human platelets.

Authors:  B W Agranoff; P Murthy; E B Seguin
Journal:  J Biol Chem       Date:  1983-02-25       Impact factor: 5.157

7.  Phosphatidylinositol 3-kinase encoded by yeast VPS34 gene essential for protein sorting.

Authors:  P V Schu; K Takegawa; M J Fry; J H Stack; M D Waterfield; S D Emr
Journal:  Science       Date:  1993-04-02       Impact factor: 47.728

8.  Alkaline O leads to N-transacylation. A new method for the quantitative deacylation of phospholipids.

Authors:  N G Clarke; R M Dawson
Journal:  Biochem J       Date:  1981-04-01       Impact factor: 3.857

9.  Osmotic stress-induced increase of phosphatidylinositol 3,5-bisphosphate requires Vac14p, an activator of the lipid kinase Fab1p.

Authors:  Cecilia J Bonangelino; Johnathan J Nau; Jason E Duex; Mikala Brinkman; Andrew E Wurmser; Jonathan D Gary; Scott D Emr; Lois S Weisman
Journal:  J Cell Biol       Date:  2002-03-11       Impact factor: 10.539

10.  PTEN Regulates PI(3,4)P2 Signaling Downstream of Class I PI3K.

Authors:  Mouhannad Malek; Anna Kielkowska; Tamara Chessa; Karen E Anderson; David Barneda; Pınar Pir; Hiroki Nakanishi; Satoshi Eguchi; Atsushi Koizumi; Junko Sasaki; Véronique Juvin; Vladimir Y Kiselev; Izabella Niewczas; Alexander Gray; Alexandre Valayer; Dominik Spensberger; Marine Imbert; Sergio Felisbino; Tomonori Habuchi; Soren Beinke; Sabina Cosulich; Nicolas Le Novère; Takehiko Sasaki; Jonathan Clark; Phillip T Hawkins; Len R Stephens
Journal:  Mol Cell       Date:  2017-10-19       Impact factor: 17.970

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  1 in total

Review 1.  Roles of PIKfyve in multiple cellular pathways.

Authors:  Pilar Rivero-Ríos; Lois S Weisman
Journal:  Curr Opin Cell Biol       Date:  2022-05-16       Impact factor: 8.386

  1 in total

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