Literature DB >> 33479756

Antigen-Based Testing but Not Real-Time Polymerase Chain Reaction Correlates With Severe Acute Respiratory Syndrome Coronavirus 2 Viral Culture.

Andrew Pekosz1,2, Valentin Parvu3, Maggie Li1, Jeffrey C Andrews3, Yukari C Manabe1,4, Salma Kodsi3, Devin S Gary3, Celine Roger-Dalbert3, Jeffry Leitch3, Charles K Cooper3.   

Abstract

BACKGROUND: Individuals can test positive for severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) by molecular assays following the resolution of their clinical disease. Recent studies indicate that SARS-CoV-2 antigen-based tests are likely to be positive early in the disease course, when there is an increased likelihood of high levels of infectious virus.
METHODS: Upper respiratory specimens from 251 participants with coronavirus disease 2019 symptoms (≤7 days from symptom onset) were prospectively collected and tested with a lateral flow antigen test and a real-time polymerase chain reaction (rt-PCR) assay for detection of SARS-CoV-2. Specimens from a subset of the study specimens were utilized to determine the presence of infectious virus in the VeroE6TMPRSS2 cell culture model.
RESULTS: The antigen test demonstrated a higher positive predictive value (90%) than rt-PCR (70%) when compared to culture-positive results. The positive percentage agreement for detection of infectious virus for the antigen test was similar to rt-PCR when compared to culture results.
CONCLUSIONS: The correlation between SARS-CoV-2 antigen and SARS-CoV-2 culture positivity represents a significant advancement in determining the risk for potential transmissibility beyond that which can be achieved by detection of SARS-CoV-2 genomic RNA. SARS-CoV-2 antigen testing can facilitate low-cost, scalable, and rapid time-to-result, while providing good risk determination of those who are likely harboring infectious virus, compared to rt-PCR.
© The Author(s) 2021. Published by Oxford University Press for the Infectious Diseases Society of America. All rights reserved. For permissions, e-mail: journals.permissions@oup.com.

Entities:  

Keywords:  SARS-CoV-2; SARS-CoV-2 live culture; antigen testing; rt-PCR testing; viral load

Year:  2021        PMID: 33479756     DOI: 10.1093/cid/ciaa1706

Source DB:  PubMed          Journal:  Clin Infect Dis        ISSN: 1058-4838            Impact factor:   9.079


  76 in total

1.  Evaluation of the Roche antigen rapid test and a cell culture-based assay compared to rRT- PCR for the detection of SARS-CoV-2: A contribution to the discussion about SARS-CoV-2 diagnostic tests and contagiousness.

Authors:  Jacqueline Steinlin-Schopfer; Maria Teresa Barbani; Richard Kamgang; Martina Zwahlen; Franziska Suter-Riniker; Ronald Dijkman
Journal:  J Clin Virol Plus       Date:  2021-05-09

2.  Antigen Test Performance Among Children and Adults at a SARS-CoV-2 Community Testing Site.

Authors:  Laura Ford; Melissa J Whaley; Melisa M Shah; Phillip P Salvatore; Hannah E Segaloff; Augustina Delaney; Dustin W Currie; Lauren Boyle-Estheimer; Michelle O'Hegarty; Clint N Morgan; Jennifer Meece; Lynn Ivacic; Natalie J Thornburg; Azaibi Tamin; Jennifer L Harcourt; Jennifer M Folster; Magdalena Medrzycki; Shilpi Jain; Phili Wong; Kimberly Goffard; Douglas Gieryn; Juliana Kahrs; Kimberly Langolf; Tara Zochert; Jacqueline E Tate; Christopher H Hsu; Hannah L Kirking
Journal:  J Pediatric Infect Dis Soc       Date:  2021-12-31       Impact factor: 3.164

Review 3.  Rapid, point-of-care antigen tests for diagnosis of SARS-CoV-2 infection.

Authors:  Jacqueline Dinnes; Pawana Sharma; Sarah Berhane; Susanna S van Wyk; Nicholas Nyaaba; Julie Domen; Melissa Taylor; Jane Cunningham; Clare Davenport; Sabine Dittrich; Devy Emperador; Lotty Hooft; Mariska Mg Leeflang; Matthew Df McInnes; René Spijker; Jan Y Verbakel; Yemisi Takwoingi; Sian Taylor-Phillips; Ann Van den Bruel; Jonathan J Deeks
Journal:  Cochrane Database Syst Rev       Date:  2022-07-22

4.  Femtomolar SARS-CoV-2 Antigen Detection Using the Microbubbling Digital Assay with Smartphone Readout Enables Antigen Burden Quantitation and Tracking.

Authors:  Hui Chen; Zhao Li; Sheng Feng; Melissa Richard-Greenblatt; Emily Hutson; Stefen Andrianus; Laurel J Glaser; Kyle G Rodino; Jianing Qian; Dinesh Jayaraman; Ronald G Collman; Abigail Glascock; Frederic D Bushman; Jae Seung Lee; Sara Cherry; Alejandra Fausto; Susan R Weiss; Hyun Koo; Patricia M Corby; Alfonso Oceguera; Una O'Doherty; Alfred L Garfall; Dan T Vogl; Edward A Stadtmauer; Ping Wang
Journal:  Clin Chem       Date:  2021-12-30       Impact factor: 8.327

5.  Rapid and low-cost sampling for detection of airborne SARS-CoV-2 in dehumidifier condensate.

Authors:  Parikshit Moitra; Maha Alafeef; Ketan Dighe; Priyanka Ray; James Chang; Aaron Thole; Benjamin Punshon-Smith; Michael Tolosa; Sai Sathish Ramamurthy; Xudong Ge; Douglas D Frey; Dipanjan Pan; Govind Rao
Journal:  Biotechnol Bioeng       Date:  2021-05-15       Impact factor: 4.395

6.  Decreased infectivity following BNT162b2 vaccination: A prospective cohort study in Israel.

Authors:  Gili Regev-Yochay; Sharon Amit; Moriah Bergwerk; Marc Lipsitch; Eyal Leshem; Rebecca Kahn; Yaniv Lustig; Carmit Cohen; Ram Doolman; Arnona Ziv; Ilya Novikov; Carmit Rubin; Irena Gimpelevich; Amit Huppert; Galia Rahav; Arnon Afek; Yitshak Kreiss
Journal:  Lancet Reg Health Eur       Date:  2021-07-07

7.  Optimizing testing for COVID-19 in India.

Authors:  Philip Cherian; Sandeep Krishna; Gautam I Menon
Journal:  PLoS Comput Biol       Date:  2021-07-22       Impact factor: 4.475

8. 

Authors:  Kevin L Schwartz; Allison J McGeer; Isaac I Bogoch
Journal:  CMAJ       Date:  2021-06-07       Impact factor: 8.262

9.  Evaluation of a Rapid Antigen Test To Detect SARS-CoV-2 Infection and Identify Potentially Infectious Individuals.

Authors:  Michael Korenkov; Nareshkumar Poopalasingam; Matthias Madler; Kanika Vanshylla; Ralf Eggeling; Maike Wirtz; Irina Fish; Felix Dewald; Lutz Gieselmann; Clara Lehmann; Gerd Fätkenheuer; Henning Gruell; Nico Pfeifer; Eva Heger; Florian Klein
Journal:  J Clin Microbiol       Date:  2021-08-18       Impact factor: 5.948

Review 10.  Analytical Performance of COVID-19 Detection Methods (RT-PCR): Scientific and Societal Concerns.

Authors:  Roberto Verna; Walter Alallon; Masami Murakami; Catherine P M Hayward; Abdel Halim Harrath; Saleh H Alwasel; Nairo M Sumita; Ozkan Alatas; Valeria Fedeli; Praveen Sharma; Andrea Fuso; Daniela Maria Capuano; Maria Capalbo; Antonio Angeloni; Mariano Bizzarri
Journal:  Life (Basel)       Date:  2021-07-06
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