Literature DB >> 33479642

Synthetic inhibitor leads of human tropomyosin receptor kinase A (hTrkA).

Govindan Subramanian1, Rajendran Vairagoundar1, Scott J Bowen1, Nicole Roush1, Theresa Zachary1, Christopher Javens1, Tracey Williams1, Ann Janssen1, Andrea Gonzales1.   

Abstract

In silico virtual screening followed by in vitro biochemical, biophysical, and cellular screening resulted in the identification of distinctly different hTrkA kinase domain inhibitor scaffolds. X-ray structural analysis of representative inhibitors bound to hTrkA kinase domain defined the binding mode and rationalized the mechanism of action. Preliminary assessment of the sub-type selectivity against the closest hTrkB isoform, and early ADME guided the progression of select inhibitor leads in the screening cascade. The possibility of the actives sustaining to known hTrkA resistance mutations assessed in silico offers initial guidance into the required multiparametric lead optimization to arrive at a clinical candidate. This journal is © The Royal Society of Chemistry 2020.

Entities:  

Year:  2020        PMID: 33479642      PMCID: PMC7536819          DOI: 10.1039/c9md00554d

Source DB:  PubMed          Journal:  RSC Med Chem        ISSN: 2632-8682


  31 in total

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Journal:  Science       Date:  2002-12-06       Impact factor: 47.728

2.  Comparison of shape-matching and docking as virtual screening tools.

Authors:  Paul C D Hawkins; A Geoffrey Skillman; Anthony Nicholls
Journal:  J Med Chem       Date:  2007-01-11       Impact factor: 7.446

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Journal:  Br J Pharmacol       Date:  2007-06-04       Impact factor: 8.739

Review 4.  Pseudoreceptor models in drug design: bridging ligand- and receptor-based virtual screening.

Authors:  Yusuf Tanrikulu; Gisbert Schneider
Journal:  Nat Rev Drug Discov       Date:  2008-07-18       Impact factor: 84.694

5.  Lead identification and characterization of hTrkA type 2 inhibitors.

Authors:  Govindan Subramanian; Yaqi Zhu; Scott J Bowen; Nicole Roush; Julie A White; Dennis Huczek; Theresa Zachary; Christopher Javens; Tracey Williams; Ann Janssen; Andrea Gonzales
Journal:  Bioorg Med Chem Lett       Date:  2019-09-13       Impact factor: 2.823

6.  Safety and Antitumor Activity of the Multitargeted Pan-TRK, ROS1, and ALK Inhibitor Entrectinib: Combined Results from Two Phase I Trials (ALKA-372-001 and STARTRK-1).

Authors:  Alexander Drilon; Salvatore Siena; Sai-Hong Ignatius Ou; Manish Patel; Myung Ju Ahn; Jeeyun Lee; Todd M Bauer; Anna F Farago; Jennifer J Wheler; Stephen V Liu; Robert Doebele; Laura Giannetta; Giulio Cerea; Giovanna Marrapese; Michele Schirru; Alessio Amatu; Katia Bencardino; Laura Palmeri; Andrea Sartore-Bianchi; Angelo Vanzulli; Sara Cresta; Silvia Damian; Matteo Duca; Elena Ardini; Gang Li; Jason Christiansen; Karey Kowalski; Ann D Johnson; Rupal Patel; David Luo; Edna Chow-Maneval; Zachary Hornby; Pratik S Multani; Alice T Shaw; Filippo G De Braud
Journal:  Cancer Discov       Date:  2017-02-09       Impact factor: 39.397

Review 7.  Properties of FDA-approved small molecule protein kinase inhibitors.

Authors:  Robert Roskoski
Journal:  Pharmacol Res       Date:  2019-03-13       Impact factor: 7.658

8.  Resistance to TRK inhibition mediated by convergent MAPK pathway activation.

Authors:  Emiliano Cocco; Alison M Schram; Amanda Kulick; Sandra Misale; Helen H Won; Rona Yaeger; Pedram Razavi; Ryan Ptashkin; Jaclyn F Hechtman; Eneda Toska; James Cownie; Romel Somwar; Sophie Shifman; Marissa Mattar; S Duygu Selçuklu; Aliaksandra Samoila; Sean Guzman; Brian B Tuch; Kevin Ebata; Elisa de Stanchina; Rebecca J Nagy; Richard B Lanman; Brian Houck-Loomis; Juber A Patel; Michael F Berger; Marc Ladanyi; David M Hyman; Alexander Drilon; Maurizio Scaltriti
Journal:  Nat Med       Date:  2019-08-12       Impact factor: 53.440

9.  The target landscape of clinical kinase drugs.

Authors:  Susan Klaeger; Stephanie Heinzlmeir; Mathias Wilhelm; Harald Polzer; Binje Vick; Paul-Albert Koenig; Maria Reinecke; Benjamin Ruprecht; Svenja Petzoldt; Chen Meng; Jana Zecha; Katrin Reiter; Huichao Qiao; Dominic Helm; Heiner Koch; Melanie Schoof; Giulia Canevari; Elena Casale; Stefania Re Depaolini; Annette Feuchtinger; Zhixiang Wu; Tobias Schmidt; Lars Rueckert; Wilhelm Becker; Jan Huenges; Anne-Kathrin Garz; Bjoern-Oliver Gohlke; Daniel Paul Zolg; Gian Kayser; Tonu Vooder; Robert Preissner; Hannes Hahne; Neeme Tõnisson; Karl Kramer; Katharina Götze; Florian Bassermann; Judith Schlegl; Hans-Christian Ehrlich; Stephan Aiche; Axel Walch; Philipp A Greif; Sabine Schneider; Eduard Rudolf Felder; Juergen Ruland; Guillaume Médard; Irmela Jeremias; Karsten Spiekermann; Bernhard Kuster
Journal:  Science       Date:  2017-12-01       Impact factor: 47.728

10.  ZINC: a free tool to discover chemistry for biology.

Authors:  John J Irwin; Teague Sterling; Michael M Mysinger; Erin S Bolstad; Ryan G Coleman
Journal:  J Chem Inf Model       Date:  2012-06-15       Impact factor: 4.956

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  1 in total

1.  Three-component microwave-assisted synthesis of 3,5-disubstituted pyrazolo[3,4-d]pyrimidin-4-ones.

Authors:  Jia Hui Ng; Edward R T Tiekink; Anton V Dolzhenko
Journal:  RSC Adv       Date:  2022-03-16       Impact factor: 3.361

  1 in total

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