Literature DB >> 33479397

Transcriptome profiling of cells exposed to particular and intense electromagnetic radiation emitted by the "SG-III" prototype laser facility.

Jiangbin Wei1, Qiwu Shi1, Lidan Xiong2, Guang Xin3, Tao Yi4, Yunqing Xiao4, Wanxia Huang5.   

Abstract

The experiment of inertial confinement fusion by the "ShengGuang (SG)-III" prototype laser facility is a transient and extreme reaction process within several nanoseconds, which could form a very complicated and intense electromagnetic field around the target chamber of the facility and may lead to harmful effect on people around. In particular, the biological effects arising from such specific environment field could hardly be ignored and have never been investigated yet, and thus, we reported on the investigation of the biological effects of radiation on HaCat cells and PC12 cells to preliminarily assess the biological safety of the target range of the "SG-III" prototype laser facility. The viability revealed that the damage of cells was dose-dependent. Then we compared the transcriptomes of exposed and unexposed PC12 cells by RNA-Seq analysis based on Illumina Novaseq 6000 platform and found that most significantly differentially expressed genes with corresponding Gene Ontology terms and pathways were strongly involved in proliferation, transformation, necrosis, inflammation response, apoptosis and DNA damage. Furthermore, we find increase in the levels of several proteins responsible for cell-cycle regulation and tumor suppression, suggesting that pathways or mechanisms regarding DNA damage repair was are quickly activated. It was found that "SG-III" prototype radiation could induce DNA damage and promote apoptotic necrosis.

Entities:  

Year:  2021        PMID: 33479397      PMCID: PMC7820428          DOI: 10.1038/s41598-021-81642-5

Source DB:  PubMed          Journal:  Sci Rep        ISSN: 2045-2322            Impact factor:   4.379


  26 in total

Review 1.  Histone H2AX in DNA damage and repair.

Authors:  Olga A Sedelnikova; Duane R Pilch; Christophe Redon; William M Bonner
Journal:  Cancer Biol Ther       Date:  2003 May-Jun       Impact factor: 4.742

2.  DNA damage checkpoint control in cells exposed to ionizing radiation.

Authors:  George Iliakis; Ya Wang; Jun Guan; Huichen Wang
Journal:  Oncogene       Date:  2003-09-01       Impact factor: 9.867

Review 3.  Functions of the neurotrophins during nervous system development: what the knockouts are teaching us.

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4.  Recurrent somatic alterations of FGFR1 and NTRK2 in pilocytic astrocytoma.

Authors:  David T W Jones; Barbara Hutter; Natalie Jäger; Andrey Korshunov; Marcel Kool; Hans-Jörg Warnatz; Thomas Zichner; Sally R Lambert; Marina Ryzhova; Dong Anh Khuong Quang; Adam M Fontebasso; Adrian M Stütz; Sonja Hutter; Marc Zuckermann; Dominik Sturm; Jan Gronych; Bärbel Lasitschka; Sabine Schmidt; Huriye Seker-Cin; Hendrik Witt; Marc Sultan; Meryem Ralser; Paul A Northcott; Volker Hovestadt; Sebastian Bender; Elke Pfaff; Sebastian Stark; Damien Faury; Jeremy Schwartzentruber; Jacek Majewski; Ursula D Weber; Marc Zapatka; Benjamin Raeder; Matthias Schlesner; Catherine L Worth; Cynthia C Bartholomae; Christof von Kalle; Charles D Imbusch; Sylwester Radomski; Chris Lawerenz; Peter van Sluis; Jan Koster; Richard Volckmann; Rogier Versteeg; Hans Lehrach; Camelia Monoranu; Beate Winkler; Andreas Unterberg; Christel Herold-Mende; Till Milde; Andreas E Kulozik; Martin Ebinger; Martin U Schuhmann; Yoon-Jae Cho; Scott L Pomeroy; Andreas von Deimling; Olaf Witt; Michael D Taylor; Stephan Wolf; Matthias A Karajannis; Charles G Eberhart; Wolfram Scheurlen; Martin Hasselblatt; Keith L Ligon; Mark W Kieran; Jan O Korbel; Marie-Laure Yaspo; Benedikt Brors; Jörg Felsberg; Guido Reifenberger; V Peter Collins; Nada Jabado; Roland Eils; Peter Lichter; Stefan M Pfister
Journal:  Nat Genet       Date:  2013-06-30       Impact factor: 38.330

5.  Intracellular domains of CXCR3 that mediate CXCL9, CXCL10, and CXCL11 function.

Authors:  Richard A Colvin; Gabriele S V Campanella; Jieti Sun; Andrew D Luster
Journal:  J Biol Chem       Date:  2004-05-17       Impact factor: 5.157

6.  Transcript assembly and quantification by RNA-Seq reveals unannotated transcripts and isoform switching during cell differentiation.

Authors:  Cole Trapnell; Brian A Williams; Geo Pertea; Ali Mortazavi; Gordon Kwan; Marijke J van Baren; Steven L Salzberg; Barbara J Wold; Lior Pachter
Journal:  Nat Biotechnol       Date:  2010-05-02       Impact factor: 54.908

7.  The Role of C-X-C Chemokine Receptor Type 4 (CXCR4) in Cell Adherence and Spheroid Formation of Human Ewing's Sarcoma Cells under Simulated Microgravity.

Authors:  Alexander Romswinkel; Manfred Infanger; Carlo Dietz; Florian Strube; Armin Kraus
Journal:  Int J Mol Sci       Date:  2019-12-02       Impact factor: 5.923

8.  Transcriptome analysis by strand-specific sequencing of complementary DNA.

Authors:  Dmitri Parkhomchuk; Tatiana Borodina; Vyacheslav Amstislavskiy; Maria Banaru; Linda Hallen; Sylvia Krobitsch; Hans Lehrach; Alexey Soldatov
Journal:  Nucleic Acids Res       Date:  2009-07-20       Impact factor: 16.971

Review 9.  VEGFA and tumour angiogenesis.

Authors:  L Claesson-Welsh; M Welsh
Journal:  J Intern Med       Date:  2013-02       Impact factor: 8.989

10.  KEGG for linking genomes to life and the environment.

Authors:  Minoru Kanehisa; Michihiro Araki; Susumu Goto; Masahiro Hattori; Mika Hirakawa; Masumi Itoh; Toshiaki Katayama; Shuichi Kawashima; Shujiro Okuda; Toshiaki Tokimatsu; Yoshihiro Yamanishi
Journal:  Nucleic Acids Res       Date:  2007-12-12       Impact factor: 16.971

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  1 in total

1.  Revealing the Specific Regulations of Brassinolide on Tomato Fruit Chilling Injury by Integrated Multi-Omics.

Authors:  Chunmei Bai; Yanyan Zheng; Christopher B Watkins; Anzhen Fu; Lili Ma; HongWu Gao; Shuzhi Yuan; Shufang Zheng; Lipu Gao; Qing Wang; Demei Meng; Jinhua Zuo
Journal:  Front Nutr       Date:  2021-12-03
  1 in total

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