Literature DB >> 33479245

The human O-GlcNAcome database and meta-analysis.

Eugenia Wulff-Fuentes1, Rex R Berendt1, Logan Massman1, Laura Danner1, Florian Malard1, Jeet Vora2, Robel Kahsay2, Stephanie Olivier-Van Stichelen3.   

Abstract

Over the past 35 years, ~1700 articles have characterized protein O-GlcNAcylation. Found in almost all living organisms, this post-translational modification of serine and threonine residues is highly conserved and key to biological processes. With half of the primary research articles using human models, the O-GlcNAcome recently reached a milestone of 5000 human proteins identified. Herein, we provide an extensive inventory of human O-GlcNAcylated proteins, their O-GlcNAc sites, identification methods, and corresponding references ( www.oglcnac.mcw.edu ). In the absence of a comprehensive online resource for O-GlcNAcylated proteins, this list serves as the only database of O-GlcNAcylated proteins. Based on the thorough analysis of the amino acid sequence surrounding 7002 O-GlcNAc sites, we progress toward a more robust semi-consensus sequence for O-GlcNAcylation. Moreover, we offer a comprehensive meta-analysis of human O-GlcNAcylated proteins for protein domains, cellular and tissue distribution, and pathways in health and diseases, reinforcing that O-GlcNAcylation is a master regulator of cell signaling, equal to the widely studied phosphorylation.

Entities:  

Mesh:

Substances:

Year:  2021        PMID: 33479245      PMCID: PMC7820439          DOI: 10.1038/s41597-021-00810-4

Source DB:  PubMed          Journal:  Sci Data        ISSN: 2052-4463            Impact factor:   6.444


  55 in total

Review 1.  The protein kinase complement of the human genome.

Authors:  G Manning; D B Whyte; R Martinez; T Hunter; S Sudarsanam
Journal:  Science       Date:  2002-12-06       Impact factor: 47.728

Review 2.  You are what you eat: O-linked N-acetylglucosamine in disease, development and epigenetics.

Authors:  Stéphanie Olivier-Van Stichelen; John A Hanover
Journal:  Curr Opin Clin Nutr Metab Care       Date:  2015-07       Impact factor: 4.294

Review 3.  The regulatory roles of O-GlcNAcylation in mitochondrial homeostasis and metabolic syndrome.

Authors:  Lin Zhao; Zhihui Feng; Xiaoyong Yang; Jiankang Liu
Journal:  Free Radic Res       Date:  2016-10-19

4.  Glucose stimulates protein modification by O-linked GlcNAc in pancreatic beta cells: linkage of O-linked GlcNAc to beta cell death.

Authors:  K Liu; A J Paterson; E Chin; J E Kudlow
Journal:  Proc Natl Acad Sci U S A       Date:  2000-03-14       Impact factor: 11.205

5.  O-Linked GlcNAc transferase is a conserved nucleocytoplasmic protein containing tetratricopeptide repeats.

Authors:  W A Lubas; D W Frank; M Krause; J A Hanover
Journal:  J Biol Chem       Date:  1997-04-04       Impact factor: 5.157

6.  Dynamic glycosylation of nuclear and cytosolic proteins. Cloning and characterization of a unique O-GlcNAc transferase with multiple tetratricopeptide repeats.

Authors:  L K Kreppel; M A Blomberg; G W Hart
Journal:  J Biol Chem       Date:  1997-04-04       Impact factor: 5.157

7.  Topography and polypeptide distribution of terminal N-acetylglucosamine residues on the surfaces of intact lymphocytes. Evidence for O-linked GlcNAc.

Authors:  C R Torres; G W Hart
Journal:  J Biol Chem       Date:  1984-03-10       Impact factor: 5.157

8.  Dietary sugars intake and cardiovascular health: a scientific statement from the American Heart Association.

Authors:  Rachel K Johnson; Lawrence J Appel; Michael Brands; Barbara V Howard; Michael Lefevre; Robert H Lustig; Frank Sacks; Lyn M Steffen; Judith Wylie-Rosett
Journal:  Circulation       Date:  2009-08-24       Impact factor: 29.690

Review 9.  The human phosphatase interactome: An intricate family portrait.

Authors:  Francesca Sacco; Livia Perfetto; Luisa Castagnoli; Gianni Cesareni
Journal:  FEBS Lett       Date:  2012-05-21       Impact factor: 4.124

10.  O-GlcNAc profiling: from proteins to proteomes.

Authors:  Junfeng Ma; Gerald W Hart
Journal:  Clin Proteomics       Date:  2014-03-05       Impact factor: 3.988

View more
  39 in total

1.  Thermal Proteome Profiling Reveals the O-GlcNAc-Dependent Meltome.

Authors:  Dustin T King; Jesús E Serrano-Negrón; Yanping Zhu; Christopher L Moore; Matthew D Shoulders; Leonard J Foster; David J Vocadlo
Journal:  J Am Chem Soc       Date:  2022-03-01       Impact factor: 15.419

2.  Synthesis and mammalian cell compatibility of light-released glycan precursors for controlled metabolic engineering.

Authors:  Courtney A Kondor; Jaggaiah N Gorantla; Garry D Leonard; Charlie Fehl
Journal:  Bioorg Med Chem       Date:  2022-07-05       Impact factor: 3.461

3.  Spatiotemporal Proximity Labeling Tools to Track GlcNAc Sugar-Modified Functional Protein Hubs during Cellular Signaling.

Authors:  Yimin Liu; Zachary M Nelson; Ali Reda; Charlie Fehl
Journal:  ACS Chem Biol       Date:  2022-07-12       Impact factor: 4.634

4.  O-GlcNAcylation suppresses TRAP1 activity and promotes mitochondrial respiration.

Authors:  Seungchan Kim; Sarah J Backe; Laura A Wengert; Anna E Johnson; Roman V Isakov; Michael S Bratslavsky; Mark R Woodford
Journal:  Cell Stress Chaperones       Date:  2022-08-17       Impact factor: 3.827

5.  Truncation of the TPR domain of OGT alters substrate and glycosite selection.

Authors:  Daniel H Ramirez; Bo Yang; Alexandria K D'Souza; Dacheng Shen; Christina M Woo
Journal:  Anal Bioanal Chem       Date:  2021-11-02       Impact factor: 4.142

6.  Drosophila O-GlcNAcase Mutants Reveal an Expanded Glycoproteome and Novel Growth and Longevity Phenotypes.

Authors:  Ilhan Akan; Adnan Halim; Sergey Y Vakhrushev; Henrik Clausen; John A Hanover
Journal:  Cells       Date:  2021-04-27       Impact factor: 6.600

Review 7.  Importance of evaluating protein glycosylation in pluripotent stem cell-derived cardiomyocytes for research and clinical applications.

Authors:  Maia I Kelly; Mustafa Albahrani; Chase Castro; Ellen Poon; Bin Yan; Jack Littrell; Matthew Waas; Kenneth R Boheler; Rebekah L Gundry
Journal:  Pflugers Arch       Date:  2021-04-08       Impact factor: 3.657

8.  A broadly active fucosyltransferase LmjFUT1 whose mitochondrial localization and activity are essential in parasitic Leishmania.

Authors:  Hongjie Guo; Sebastian Damerow; Luciana Penha; Stefanie Menzies; Gloria Polanco; Hicham Zegzouti; Michael A J Ferguson; Stephen M Beverley
Journal:  Proc Natl Acad Sci U S A       Date:  2021-08-17       Impact factor: 12.779

Review 9.  Mechanistic roles for altered O-GlcNAcylation in neurodegenerative disorders.

Authors:  Aaron T Balana; Matthew R Pratt
Journal:  Biochem J       Date:  2021-07-30       Impact factor: 3.766

10.  Automatization and self-maintenance of the O-GlcNAcome catalog: a smart scientific database.

Authors:  Florian Malard; Eugenia Wulff-Fuentes; Rex R Berendt; Guillaume Didier; Stephanie Olivier-Van Stichelen
Journal:  Database (Oxford)       Date:  2021-07-19       Impact factor: 3.451

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.