Literature DB >> 33478979

A Scalable, Easy-to-Deploy Protocol for Cas13-Based Detection of SARS-CoV-2 Genetic Material.

Jennifer N Rauch1,2, Eric Valois1,2, Diego Acosta-Alvear3,2, Maxwell Z Wilson3,2,4, Sabrina C Solley1, Friederike Braig1, Ryan S Lach1, Morgane Audouard1,2, Jose Carlos Ponce-Rojas1, Michael S Costello1, Naomi J Baxter1, Kenneth S Kosik1,2, Carolina Arias1,2.   

Abstract

The COVID-19 pandemic has created massive demand for widespread, distributed tools for detecting SARS-CoV-2 genetic material. The hurdles to scalable testing include reagent and instrument accessibility, availability of highly trained personnel, and large upfront investment. Here, we showcase an orthogonal pipeline we call CREST (Cas13-based, rugged, equitable, scalable testing) that addresses some of these hurdles. Specifically, CREST pairs commonplace and reliable biochemical methods (PCR) with low-cost instrumentation, without sacrificing detection sensitivity. By taking advantage of simple fluorescence visualizers, CREST allows a binary interpretation of results. CREST may provide a point-of-care solution to increase the distribution of COVID-19 surveillance.
Copyright © 2021 Rauch et al.

Entities:  

Keywords:  COVID-19; CRISPR; Cas13; SARS-CoV-2; point of care; testing

Year:  2021        PMID: 33478979     DOI: 10.1128/JCM.02402-20

Source DB:  PubMed          Journal:  J Clin Microbiol        ISSN: 0095-1137            Impact factor:   5.948


  29 in total

1.  Rapid, adaptable and sensitive Cas13-based COVID-19 diagnostics using ADESSO.

Authors:  Beatrice Casati; Joseph Peter Verdi; Alexander Hempelmann; Maximilian Kittel; Andrea Gutierrez Klaebisch; Bianca Meister; Sybille Welker; Sonal Asthana; Salvatore Di Giorgio; Pavle Boskovic; Ka Hou Man; Meike Schopp; Paul Adrian Ginno; Bernhard Radlwimmer; Charles Erec Stebbins; Thomas Miethke; Fotini Nina Papavasiliou; Riccardo Pecori
Journal:  Nat Commun       Date:  2022-06-08       Impact factor: 17.694

Review 2.  Diagnostics of COVID-19 Based on CRISPR-Cas Coupled to Isothermal Amplification: A Comparative Analysis and Update.

Authors:  Armando Hernandez-Garcia; Melissa D Morales-Moreno; Erick G Valdés-Galindo; Eric P Jimenez-Nieto; Andrea Quezada
Journal:  Diagnostics (Basel)       Date:  2022-06-10

3.  Molecular and Serologic Diagnostic Technologies for SARS-CoV-2.

Authors:  Halie M Rando; Christian Brueffer; Ronan Lordan; Anna Ada Dattoli; David Manheim; Jesse G Meyer; Ariel I Mundo; Dimitri Perrin; David Mai; Nils Wellhausen; Covid-Review Consortium; Anthony Gitter; Casey S Greene
Journal:  ArXiv       Date:  2022-04-26

4.  Figure of Merit for CRISPR-Based Nucleic Acid-Sensing Systems: Improvement Strategies and Performance Comparison.

Authors:  Reza Nouri; Ming Dong; Anthony J Politza; Weihua Guan
Journal:  ACS Sens       Date:  2022-03-03       Impact factor: 9.618

5.  Evaluation of CRISPR-Based Assays for Rapid Detection of SARS-CoV-2: A Systematic Review and Meta-Analysis.

Authors:  Pei-Ying Huang; Xin Yin; Yue-Ting Huang; Qi-Qing Ye; Si-Qing Chen; Xun-Jie Cao; Tian-Ao Xie; Xu-Guang Guo
Journal:  Yonsei Med J       Date:  2022-05       Impact factor: 3.052

6.  Antibody tests for identification of current and past infection with SARS-CoV-2.

Authors:  Jonathan J Deeks; Jacqueline Dinnes; Yemisi Takwoingi; Clare Davenport; René Spijker; Sian Taylor-Phillips; Ada Adriano; Sophie Beese; Janine Dretzke; Lavinia Ferrante di Ruffano; Isobel M Harris; Malcolm J Price; Sabine Dittrich; Devy Emperador; Lotty Hooft; Mariska Mg Leeflang; Ann Van den Bruel
Journal:  Cochrane Database Syst Rev       Date:  2020-06-25

Review 7.  Emerging diagnostic tools for detection of COVID-19 and perspective.

Authors:  Nidhi Verma; Dhaval Patel; Alok Pandya
Journal:  Biomed Microdevices       Date:  2020-11-24       Impact factor: 2.838

Review 8.  CRISPR-based detection of SARS-CoV-2: A review from sample to result.

Authors:  Reza Nouri; Zifan Tang; Ming Dong; Tianyi Liu; Aneesh Kshirsagar; Weihua Guan
Journal:  Biosens Bioelectron       Date:  2021-01-21       Impact factor: 12.545

9.  A CRISPR-based assay for the study of eukaryotic DNA repair onboard the International Space Station.

Authors:  Sarah Stahl-Rommel; David Li; Michelle Sung; Rebecca Li; Aarthi Vijayakumar; Kutay Deniz Atabay; G Guy Bushkin; Christian L Castro; Kevin D Foley; D Scott Copeland; Sarah L Castro-Wallace; Ezequiel Alvarez Saavedra; Emily J Gleason; Sebastian Kraves
Journal:  PLoS One       Date:  2021-06-30       Impact factor: 3.240

Review 10.  Recent progress on rapid SARS-CoV-2/COVID-19 detection by CRISPR-Cas13-based platforms.

Authors:  Guillermo Aquino-Jarquin
Journal:  Drug Discov Today       Date:  2021-06-18       Impact factor: 7.851

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