Zhangying Hao1,2, Sasha Yogiswara1,2, Tong Wei1,2,3,4, Veronica Teixeira Benites1,2, Anagh Sinha1,2, George Wang1,5, Edward E K Baidoo1,5, Pamela C Ronald1,2,3, Henrik V Scheller1,2,6, Dominique Loqué1,2, Aymerick Eudes7,8. 1. Joint BioEnergy Institute, Emeryville, CA, 94608, USA. 2. Environmental Genomics and Systems Biology Division, Lawrence Berkeley National Laboratory, Berkeley, CA, 94720, USA. 3. Department of Plant Pathology and the Genome Center, University of California, Davis, CA, 95616, USA. 4. Present address: State Key Laboratory of Agricultural Genomics, BGI-Shenzhen, Shenzhen, 518000, China. 5. Biological Systems and Engineering Division, Lawrence Berkeley National Laboratory, Berkeley, CA, 94720, USA. 6. Department of Plant and Microbial Biology, University of California-Berkeley, Berkeley, CA, 94720, USA. 7. Joint BioEnergy Institute, Emeryville, CA, 94608, USA. ageudes@lbl.gov. 8. Environmental Genomics and Systems Biology Division, Lawrence Berkeley National Laboratory, Berkeley, CA, 94720, USA. ageudes@lbl.gov.
Abstract
BACKGROUND: Lignin deposited in plant cell walls negatively affects biomass conversion into advanced bioproducts. There is therefore a strong interest in developing bioenergy crops with reduced lignin content or altered lignin structures. Another desired trait for bioenergy crops is the ability to accumulate novel bioproducts, which would enhance the development of economically sustainable biorefineries. As previously demonstrated in the model plant Arabidopsis, expression of a 3-dehydroshikimate dehydratase in plants offers the potential for decreasing lignin content and overproducing a value-added metabolic coproduct (i.e., protocatechuate) suitable for biological upgrading. RESULTS: The 3-dehydroshikimate dehydratase QsuB from Corynebacterium glutamicum was expressed in the bioenergy crop switchgrass (Panicum virgatum L.) using the stem-specific promoter of an O-methyltransferase gene (pShOMT) from sugarcane. The activity of pShOMT was validated in switchgrass after observation in-situ of beta-glucuronidase (GUS) activity in stem nodes of plants carrying a pShOMT::GUS fusion construct. Under controlled growth conditions, engineered switchgrass lines containing a pShOMT::QsuB construct showed reductions of lignin content, improvements of biomass saccharification efficiency, and accumulated higher amount of protocatechuate compared to control plants. Attempts to generate transgenic switchgrass lines carrying the QsuB gene under the control of the constitutive promoter pZmUbi-1 were unsuccessful, suggesting possible toxicity issues associated with ectopic QsuB expression during the plant regeneration process. CONCLUSION: This study validates the transfer of the QsuB engineering approach from a model plant to switchgrass. We have demonstrated altered expression of two important traits: lignin content and accumulation of a co-product. We found that the choice of promoter to drive QsuB expression should be carefully considered when deploying this strategy to other bioenergy crops. Field-testing of engineered QsuB switchgrass are in progress to assess the performance of the introduced traits and agronomic performances of the transgenic plants.
BACKGROUND:Lignin deposited in plant cell walls negatively affects biomass conversion into advanced bioproducts. There is therefore a strong interest in developing bioenergy crops with reduced lignin content or altered lignin structures. Another desired trait for bioenergy crops is the ability to accumulate novel bioproducts, which would enhance the development of economically sustainable biorefineries. As previously demonstrated in the model plant Arabidopsis, expression of a 3-dehydroshikimate dehydratase in plants offers the potential for decreasing lignin content and overproducing a value-added metabolic coproduct (i.e., protocatechuate) suitable for biological upgrading. RESULTS: The 3-dehydroshikimate dehydratase QsuB from Corynebacterium glutamicum was expressed in the bioenergy crop switchgrass (Panicum virgatum L.) using the stem-specific promoter of an O-methyltransferase gene (pShOMT) from sugarcane. The activity of pShOMT was validated in switchgrass after observation in-situ of beta-glucuronidase (GUS) activity in stem nodes of plants carrying a pShOMT::GUS fusion construct. Under controlled growth conditions, engineered switchgrass lines containing a pShOMT::QsuB construct showed reductions of lignin content, improvements of biomass saccharification efficiency, and accumulated higher amount of protocatechuate compared to control plants. Attempts to generate transgenic switchgrass lines carrying the QsuB gene under the control of the constitutive promoter pZmUbi-1 were unsuccessful, suggesting possible toxicity issues associated with ectopic QsuB expression during the plant regeneration process. CONCLUSION: This study validates the transfer of the QsuB engineering approach from a model plant to switchgrass. We have demonstrated altered expression of two important traits: lignin content and accumulation of a co-product. We found that the choice of promoter to drive QsuB expression should be carefully considered when deploying this strategy to other bioenergy crops. Field-testing of engineered QsuBswitchgrass are in progress to assess the performance of the introduced traits and agronomic performances of the transgenic plants.
Authors: Mona B Damaj; Siva P Kumpatla; Chandrakanth Emani; Phillip D Beremand; Avutu S Reddy; Keerti S Rathore; Marco T Buenrostro-Nava; Ian S Curtis; Terry L Thomas; T Erik Mirkov Journal: Planta Date: 2010-03-30 Impact factor: 4.116
Authors: Richard S Nelson; C Neal Stewart; Jiqing Gou; Susan Holladay; Lina Gallego-Giraldo; Amy Flanagan; David G J Mann; Hiroshi Hisano; Wegi A Wuddineh; Charleson R Poovaiah; Avinash Srivastava; Ajaya K Biswal; Hui Shen; Luis L Escamilla-Treviño; Jiading Yang; C Frank Hardin; Rangaraj Nandakumar; Chunxiang Fu; Jiyi Zhang; Xirong Xiao; Ryan Percifield; Fang Chen; Jeffrey L Bennetzen; Michael Udvardi; Mitra Mazarei; Richard A Dixon; Zeng-Yu Wang; Yuhong Tang; Debra Mohnen; Brian H Davison Journal: Biotechnol Biofuels Date: 2017-12-22 Impact factor: 6.040
Authors: Aymerick Eudes; Noppadon Sathitsuksanoh; Edward E K Baidoo; Anthe George; Yan Liang; Fan Yang; Seema Singh; Jay D Keasling; Blake A Simmons; Dominique Loqué Journal: Plant Biotechnol J Date: 2015-01-13 Impact factor: 9.803
Authors: Faride Unda; Yaseen Mottiar; Elizabeth L Mahon; Steven D Karlen; Kwang Ho Kim; Dominique Loqué; Aymerick Eudes; John Ralph; Shawn D Mansfield Journal: New Phytol Date: 2022-05-04 Impact factor: 10.323
Authors: Chien-Yuan Lin; Yang Tian; Kimberly Nelson-Vasilchik; Joel Hague; Ramu Kakumanu; Mi Yeon Lee; Venkataramana R Pidatala; Jessica Trinh; Christopher M De Ben; Jutta Dalton; Trent R Northen; Edward E K Baidoo; Blake A Simmons; John M Gladden; Corinne D Scown; Daniel H Putnam; Albert P Kausch; Henrik V Scheller; Aymerick Eudes Journal: Metab Eng Commun Date: 2022-09-21