Literature DB >> 33477649

Prevalence of Co-Infections with Respiratory Viruses in Individuals Investigated for SARS-CoV-2 in Ontario, Canada.

Adriana Peci1, Vanessa Tran1,2, Jennifer L Guthrie1, Ye Li1,3, Paul Nelson1, Kevin L Schwartz1,3,4, AliReza Eshaghi1, Sarah A Buchan1,3, Jonathan B Gubbay1,2,5.   

Abstract

BACKGROUND: Co-infections of severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) with respiratory viruses, bacteria and fungi have been reported to cause a wide range of illness.
OBJECTIVES: We assess the prevalence of co-infection of SARS-CoV-2 with seasonal respiratory viruses, document the respiratory viruses detected among individuals tested for SARS-CoV-2, and describe characteristics of individuals with respiratory virus co-infection detected.
METHODS: Specimens included in this study were submitted as part of routine clinical testing to Public Health Ontario Laboratory from individuals requiring testing for SARS-CoV-2 and/or seasonal respiratory viruses.
RESULTS: Co-infection was detected in a smaller proportion (2.5%) of individuals with laboratory confirmed SARS-CoV-2 than those with seasonal respiratory viruses (4.3%); this difference was not significant. Individuals with any respiratory virus co-infection were more likely to be younger than 65 years of age and male than those with single infection. Those with SARS-CoV-2 co-infection manifested mostly mild respiratory symptoms.
CONCLUSIONS: Findings of this study may not support routine testing for seasonal respiratory viruses among all individuals tested for SARS-CoV-2, as they were rare during the study period nor associated with severe disease. However, testing for seasonal respiratory viruses should be performed in severely ill individuals, in which detection of other viruses may assist with patient management.

Entities:  

Keywords:  COVID-19; SARS-CoV-2; co-infection; seasonal respiratory viruses

Mesh:

Year:  2021        PMID: 33477649      PMCID: PMC7831481          DOI: 10.3390/v13010130

Source DB:  PubMed          Journal:  Viruses        ISSN: 1999-4915            Impact factor:   5.048


  18 in total

1.  Clinical characteristics of 140 patients infected with SARS-CoV-2 in Wuhan, China.

Authors:  Jin-Jin Zhang; Xiang Dong; Yi-Yuan Cao; Ya-Dong Yuan; Yi-Bin Yang; You-Qin Yan; Cezmi A Akdis; Ya-Dong Gao
Journal:  Allergy       Date:  2020-02-27       Impact factor: 13.146

2.  Rates of Co-infection Between SARS-CoV-2 and Other Respiratory Pathogens.

Authors:  David Kim; James Quinn; Benjamin Pinsky; Nigam H Shah; Ian Brown
Journal:  JAMA       Date:  2020-05-26       Impact factor: 56.272

3.  Coinfection of SARS-CoV-2 and multiple respiratory pathogens in children.

Authors:  Shupeng Jiang; Panpan Liu; Ge Xiong; Zhaohui Yang; Ming Wang; Yan Li; Xue-Jie Yu
Journal:  Clin Chem Lab Med       Date:  2020-06-25       Impact factor: 3.694

4.  Co-infection with SARS-CoV-2 and Human Metapneumovirus.

Authors:  Francine Touzard-Romo; Chantal Tapé; John R Lonks
Journal:  R I Med J (2013)       Date:  2020-03-19

5.  Coinfection and Other Clinical Characteristics of COVID-19 in Children.

Authors:  Qin Wu; Yuhan Xing; Lei Shi; Wenjie Li; Yang Gao; Silin Pan; Ying Wang; Wendi Wang; Quansheng Xing
Journal:  Pediatrics       Date:  2020-05-06       Impact factor: 7.124

6.  Epidemiological and clinical characteristics of 99 cases of 2019 novel coronavirus pneumonia in Wuhan, China: a descriptive study.

Authors:  Nanshan Chen; Min Zhou; Xuan Dong; Jieming Qu; Fengyun Gong; Yang Han; Yang Qiu; Jingli Wang; Ying Liu; Yuan Wei; Jia'an Xia; Ting Yu; Xinxin Zhang; Li Zhang
Journal:  Lancet       Date:  2020-01-30       Impact factor: 79.321

Review 7.  Bacterial co-infection and secondary infection in patients with COVID-19: a living rapid review and meta-analysis.

Authors:  Bradley J Langford; Miranda So; Sumit Raybardhan; Valerie Leung; Duncan Westwood; Derek R MacFadden; Jean-Paul R Soucy; Nick Daneman
Journal:  Clin Microbiol Infect       Date:  2020-07-22       Impact factor: 8.067

8.  Co-infections: potentially lethal and unexplored in COVID-19.

Authors:  Michael J Cox; Nicholas Loman; Debby Bogaert; Justin O'Grady
Journal:  Lancet Microbe       Date:  2020-04-24

9.  Clinical course and risk factors for mortality of adult inpatients with COVID-19 in Wuhan, China: a retrospective cohort study.

Authors:  Fei Zhou; Ting Yu; Ronghui Du; Guohui Fan; Ying Liu; Zhibo Liu; Jie Xiang; Yeming Wang; Bin Song; Xiaoying Gu; Lulu Guan; Yuan Wei; Hui Li; Xudong Wu; Jiuyang Xu; Shengjin Tu; Yi Zhang; Hua Chen; Bin Cao
Journal:  Lancet       Date:  2020-03-11       Impact factor: 79.321

10.  Differential diagnosis of illness in patients under investigation for the novel coronavirus (SARS-CoV-2), Italy, February 2020.

Authors:  Licia Bordi; Emanuele Nicastri; Laura Scorzolini; Antonino Di Caro; Maria Rosaria Capobianchi; Concetta Castilletti; Eleonora Lalle
Journal:  Euro Surveill       Date:  2020-02
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  12 in total

1.  Prevalence and outcomes of co-infection and superinfection with SARS-CoV-2 and other pathogens: A systematic review and meta-analysis.

Authors:  Jackson S Musuuza; Lauren Watson; Vishala Parmasad; Nathan Putman-Buehler; Leslie Christensen; Nasia Safdar
Journal:  PLoS One       Date:  2021-05-06       Impact factor: 3.240

2.  The impact of the COVID-19 pandemic on influenza, respiratory syncytial virus, and other seasonal respiratory virus circulation in Canada: A population-based study.

Authors:  Helen E Groves; Pierre-Philippe Piché-Renaud; Adriana Peci; Daniel S Farrar; Steven Buckrell; Christina Bancej; Claire Sevenhuysen; Aaron Campigotto; Jonathan B Gubbay; Shaun K Morris
Journal:  Lancet Reg Health Am       Date:  2021-07-17

Review 3.  The Complexity of Co-Infections in the Era of COVID-19.

Authors:  Nevio Cimolai
Journal:  SN Compr Clin Med       Date:  2021-04-23

4.  Incidence and Outcome of Coinfections with SARS-CoV-2 and Rhinovirus.

Authors:  Elisabeth Le Glass; Van Thuan Hoang; Céline Boschi; Laetitia Ninove; Christine Zandotti; Aurélie Boutin; Valérie Bremond; Grégory Dubourg; Stéphane Ranque; Jean-Christophe Lagier; Matthieu Million; Pierre-Edouard Fournier; Michel Drancourt; Philippe Gautret; Philippe Colson
Journal:  Viruses       Date:  2021-12-16       Impact factor: 5.048

5.  Prevalence of primary bacterial co-infections among patients with COVID-19 in Brunei Darussalam.

Authors:  Aieman Bashir; Muhammad Syafiq Abdullah; Natalie Raimiza Momin; Pui Lin Chong; Rosmonaliza Asli; Babu Mani Ivan; Vui Heng Chong
Journal:  Western Pac Surveill Response J       Date:  2021-09-08

6.  RespiCoV: Simultaneous identification of Severe Acute Respiratory Syndrome Coronavirus 2 (SARS-CoV-2) and 46 respiratory tract viruses and bacteria by amplicon-based Oxford-Nanopore MinION sequencing.

Authors:  Annika Brinkmann; Steven Uddin; Sophie-Luisa Ulm; Katharina Pape; Sophie Förster; Khalid Enan; Jalal Nourlil; Eva Krause; Lars Schaade; Janine Michel; Andreas Nitsche
Journal:  PLoS One       Date:  2022-03-09       Impact factor: 3.240

7.  Prevalence and Clinical Impact of Coinfection in Patients with Coronavirus Disease 2019 in Korea.

Authors:  Seri Jeong; Nuri Lee; Yeeun Park; Jaehong Kim; Kibum Jeon; Min-Jeong Park; Wonkeun Song
Journal:  Viruses       Date:  2022-02-21       Impact factor: 5.048

8.  The effect of the COVID-19 pandemic on influenza-related hospitalization, intensive care admission and mortality in children in Canada: A population-based study.

Authors:  Helen E Groves; Jesse Papenburg; Kayur Mehta; Julie A Bettinger; Manish Sadarangani; Scott A Halperin; Shaun K Morris
Journal:  Lancet Reg Health Am       Date:  2021-12-05

Review 9.  Innate Immunity in Children and the Role of ACE2 Expression in SARS-CoV-2 Infection.

Authors:  Mario Dioguardi; Angela Pia Cazzolla; Claudia Arena; Diego Sovereto; Giorgia Apollonia Caloro; Antonio Dioguardi; Vito Crincoli; Luigi Laino; Giuseppe Troiano; Lorenzo Lo Muzio
Journal:  Pediatr Rep       Date:  2021-07-02

10.  KI and WU Polyomavirus in Respiratory Samples of SARS-CoV-2 Infected Patients.

Authors:  Carla Prezioso; Ugo Moens; Giuseppe Oliveto; Gabriele Brazzini; Francesca Piacentini; Federica Frasca; Agnese Viscido; Mirko Scordio; Giuliana Guerrizio; Donatella Maria Rodio; Alessandra Pierangeli; Gabriella d'Ettorre; Ombretta Turriziani; Guido Antonelli; Carolina Scagnolari; Valeria Pietropaolo
Journal:  Microorganisms       Date:  2021-06-09
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