Literature DB >> 33477448

Formation and Function of Liquid-Like Viral Factories in Negative-Sense Single-Stranded RNA Virus Infections.

Justin M Su1, Maxwell Z Wilson1, Charles E Samuel1, Dzwokai Ma1.   

Abstract

Liquid-liquid phase separation (LLPS) represents a major physiochemical principle to organize intracellular membrane-less structures. Studies with non-segmented negative-sense (NNS) RNA viruses have uncovered a key role of LLPS in the formation of viral inclusion bodies (IBs), sites of viral protein concentration in the cytoplasm of infected cells. These studies further reveal the structural and functional complexity of viral IB factories and provide a foundation for their future research. Herein, we review the literature leading to the discovery of LLPS-driven formation of IBs in NNS RNA virus-infected cells and the identification of viral scaffold components involved, and then outline important questions and challenges for IB assembly and disassembly. We discuss the functional implications of LLPS in the life cycle of NNS RNA viruses and host responses to infection. Finally, we speculate on the potential mechanisms underlying IB maturation, a phenomenon relevant to many human diseases.

Entities:  

Keywords:  RNA binding protein; biophysical processes; inclusion body negative-strand RNA virus; liquid–liquid phase separation; measles virus; membrane; viral mediated host remodeling; viral replication

Year:  2021        PMID: 33477448      PMCID: PMC7835873          DOI: 10.3390/v13010126

Source DB:  PubMed          Journal:  Viruses        ISSN: 1999-4915            Impact factor:   5.048


  105 in total

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Authors:  Avinash Patel; Hyun O Lee; Louise Jawerth; Shovamayee Maharana; Marcus Jahnel; Marco Y Hein; Stoyno Stoynov; Julia Mahamid; Shambaditya Saha; Titus M Franzmann; Andrej Pozniakovski; Ina Poser; Nicola Maghelli; Loic A Royer; Martin Weigert; Eugene W Myers; Stephan Grill; David Drechsel; Anthony A Hyman; Simon Alberti
Journal:  Cell       Date:  2015-08-27       Impact factor: 41.582

2.  Phase separation drives heterochromatin domain formation.

Authors:  Amy R Strom; Alexander V Emelyanov; Mustafa Mir; Dmitry V Fyodorov; Xavier Darzacq; Gary H Karpen
Journal:  Nature       Date:  2017-06-21       Impact factor: 49.962

3.  Proteomic mapping of mitochondria in living cells via spatially restricted enzymatic tagging.

Authors:  Hyun-Woo Rhee; Peng Zou; Namrata D Udeshi; Jeffrey D Martell; Vamsi K Mootha; Steven A Carr; Alice Y Ting
Journal:  Science       Date:  2013-01-31       Impact factor: 47.728

4.  Stress granule formation induced by measles virus is protein kinase PKR dependent and impaired by RNA adenosine deaminase ADAR1.

Authors:  Kristina M Okonski; Charles E Samuel
Journal:  J Virol       Date:  2012-10-31       Impact factor: 5.103

5.  Coactivator condensation at super-enhancers links phase separation and gene control.

Authors:  Benjamin R Sabari; Alessandra Dall'Agnese; Ann Boija; Isaac A Klein; Eliot L Coffey; Krishna Shrinivas; Brian J Abraham; Nancy M Hannett; Alicia V Zamudio; John C Manteiga; Charles H Li; Yang E Guo; Daniel S Day; Jurian Schuijers; Eliza Vasile; Sohail Malik; Denes Hnisz; Tong Ihn Lee; Ibrahim I Cisse; Robert G Roeder; Phillip A Sharp; Arup K Chakraborty; Richard A Young
Journal:  Science       Date:  2018-06-21       Impact factor: 47.728

6.  Pan-retroviral Nucleocapsid-Mediated Phase Separation Regulates Genomic RNA Positioning and Trafficking.

Authors:  Anne Monette; Meijuan Niu; Lois Chen; Shringar Rao; Robert James Gorelick; Andrew John Mouland
Journal:  Cell Rep       Date:  2020-04-21       Impact factor: 9.423

7.  Functional organization of cytoplasmic inclusion bodies in cells infected by respiratory syncytial virus.

Authors:  Vincent Rincheval; Mickael Lelek; Elyanne Gault; Camille Bouillier; Delphine Sitterlin; Sabine Blouquit-Laye; Marie Galloux; Christophe Zimmer; Jean-François Eleouet; Marie-Anne Rameix-Welti
Journal:  Nat Commun       Date:  2017-09-15       Impact factor: 14.919

Review 8.  Virus factories: associations of cell organelles for viral replication and morphogenesis.

Authors:  Reyes R Novoa; Gloria Calderita; Rocío Arranz; Juan Fontana; Harald Granzow; Cristina Risco
Journal:  Biol Cell       Date:  2005-02       Impact factor: 4.458

9.  Crystal structure of the nipah virus phosphoprotein tetramerization domain.

Authors:  Jessica F Bruhn; Katherine C Barnett; Jaclyn Bibby; Jens M H Thomas; Ronan M Keegan; Daniel J Rigden; Zachary A Bornholdt; Erica Ollmann Saphire
Journal:  J Virol       Date:  2013-10-23       Impact factor: 5.103

10.  Minimal Elements Required for the Formation of Respiratory Syncytial Virus Cytoplasmic Inclusion Bodies In Vivo and In Vitro.

Authors:  Marie Galloux; Jennifer Risso-Ballester; Charles-Adrien Richard; Jenna Fix; Marie-Anne Rameix-Welti; Jean-François Eléouët
Journal:  mBio       Date:  2020-09-22       Impact factor: 7.867

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  5 in total

Review 1.  Melatonin: Regulation of Viral Phase Separation and Epitranscriptomics in Post-Acute Sequelae of COVID-19.

Authors:  Doris Loh; Russel J Reiter
Journal:  Int J Mol Sci       Date:  2022-07-23       Impact factor: 6.208

2.  Host casein kinase 1-mediated phosphorylation modulates phase separation of a rhabdovirus phosphoprotein and virus infection.

Authors:  Xiao-Dong Fang; Qiang Gao; Ying Zang; Ji-Hui Qiao; Dong-Min Gao; Wen-Ya Xu; Ying Wang; Dawei Li; Xian-Bing Wang
Journal:  Elife       Date:  2022-02-22       Impact factor: 8.140

Review 3.  Modulating biomolecular condensates: a novel approach to drug discovery.

Authors:  Diana M Mitrea; Matthäus Mittasch; Beatriz Ferreira Gomes; Isaac A Klein; Mark A Murcko
Journal:  Nat Rev Drug Discov       Date:  2022-08-16       Impact factor: 112.288

4.  Structural Analysis of the Menangle Virus P Protein Reveals a Soft Boundary between Ordered and Disordered Regions.

Authors:  Melissa N Webby; Nicole Herr; Esther M M Bulloch; Michael Schmitz; Jeremy R Keown; David C Goldstone; Richard L Kingston
Journal:  Viruses       Date:  2021-08-31       Impact factor: 5.048

5.  Evidence That the Adenovirus Single-Stranded DNA Binding Protein Mediates the Assembly of Biomolecular Condensates to Form Viral Replication Compartments.

Authors:  Paloma Hidalgo; Arturo Pimentel; Diana Mojica-Santamaría; Konstantin von Stromberg; Helga Hofmann-Sieber; Christian Lona-Arrona; Thomas Dobner; Ramón A González
Journal:  Viruses       Date:  2021-09-06       Impact factor: 5.048

  5 in total

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