Literature DB >> 33476315

Emergence of SARS-CoV-2 B.1.1.7 Lineage - United States, December 29, 2020-January 12, 2021.

Summer E Galloway, Prabasaj Paul, Duncan R MacCannell, Michael A Johansson, John T Brooks, Adam MacNeil, Rachel B Slayton, Suxiang Tong, Benjamin J Silk, Gregory L Armstrong, Matthew Biggerstaff, Vivien G Dugan.   

Abstract

On December 14, 2020, the United Kingdom reported a SARS-CoV-2 variant of concern (VOC), lineage B.1.1.7, also referred to as VOC 202012/01 or 20I/501Y.V1.* The B.1.1.7 variant is estimated to have emerged in September 2020 and has quickly become the dominant circulating SARS-CoV-2 variant in England (1). B.1.1.7 has been detected in over 30 countries, including the United States. As of January 13, 2021, approximately 76 cases of B.1.1.7 have been detected in 12 U.S. states.† Multiple lines of evidence indicate that B.1.1.7 is more efficiently transmitted than are other SARS-CoV-2 variants (1-3). The modeled trajectory of this variant in the U.S. exhibits rapid growth in early 2021, becoming the predominant variant in March. Increased SARS-CoV-2 transmission might threaten strained health care resources, require extended and more rigorous implementation of public health strategies (4), and increase the percentage of population immunity required for pandemic control. Taking measures to reduce transmission now can lessen the potential impact of B.1.1.7 and allow critical time to increase vaccination coverage. Collectively, enhanced genomic surveillance combined with continued compliance with effective public health measures, including vaccination, physical distancing, use of masks, hand hygiene, and isolation and quarantine, will be essential to limiting the spread of SARS-CoV-2, the virus that causes coronavirus disease 2019 (COVID-19). Strategic testing of persons without symptoms but at higher risk of infection, such as those exposed to SARS-CoV-2 or who have frequent unavoidable contact with the public, provides another opportunity to limit ongoing spread.

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Year:  2021        PMID: 33476315      PMCID: PMC7821772          DOI: 10.15585/mmwr.mm7003e2

Source DB:  PubMed          Journal:  MMWR Morb Mortal Wkly Rep        ISSN: 0149-2195            Impact factor:   17.586


  6 in total

1.  Evaluating the Effects of SARS-CoV-2 Spike Mutation D614G on Transmissibility and Pathogenicity.

Authors:  Erik Volz; Verity Hill; John T McCrone; Anna Price; David Jorgensen; Áine O'Toole; Joel Southgate; Robert Johnson; Ben Jackson; Fabricia F Nascimento; Sara M Rey; Samuel M Nicholls; Rachel M Colquhoun; Ana da Silva Filipe; James Shepherd; David J Pascall; Rajiv Shah; Natasha Jesudason; Kathy Li; Ruth Jarrett; Nicole Pacchiarini; Matthew Bull; Lily Geidelberg; Igor Siveroni; Ian Goodfellow; Nicholas J Loman; Oliver G Pybus; David L Robertson; Emma C Thomson; Andrew Rambaut; Thomas R Connor
Journal:  Cell       Date:  2020-11-19       Impact factor: 41.582

2.  Escape from neutralizing antibodies by SARS-CoV-2 spike protein variants.

Authors:  Yiska Weisblum; Fabian Schmidt; Fengwen Zhang; Justin DaSilva; Daniel Poston; Julio Cc Lorenzi; Frauke Muecksch; Magdalena Rutkowska; Hans-Heinrich Hoffmann; Eleftherios Michailidis; Christian Gaebler; Marianna Agudelo; Alice Cho; Zijun Wang; Anna Gazumyan; Melissa Cipolla; Larry Luchsinger; Christopher D Hillyer; Marina Caskey; Davide F Robbiani; Charles M Rice; Michel C Nussenzweig; Theodora Hatziioannou; Paul D Bieniasz
Journal:  Elife       Date:  2020-10-28       Impact factor: 8.140

3.  Recurrent deletions in the SARS-CoV-2 spike glycoprotein drive antibody escape.

Authors:  Kevin R McCarthy; Linda J Rennick; Sham Nambulli; Lindsey R Robinson-McCarthy; William G Bain; Ghady Haidar; W Paul Duprex
Journal:  Science       Date:  2021-02-03       Impact factor: 47.728

4.  Comprehensive mapping of mutations in the SARS-CoV-2 receptor-binding domain that affect recognition by polyclonal human plasma antibodies.

Authors:  Allison J Greaney; Andrea N Loes; Katharine H D Crawford; Tyler N Starr; Keara D Malone; Helen Y Chu; Jesse D Bloom
Journal:  Cell Host Microbe       Date:  2021-02-08       Impact factor: 21.023

5.  Summary of Guidance for Public Health Strategies to Address High Levels of Community Transmission of SARS-CoV-2 and Related Deaths, December 2020.

Authors:  Margaret A Honein; Athalia Christie; Dale A Rose; John T Brooks; Dana Meaney-Delman; Amanda Cohn; Erin K Sauber-Schatz; Allison Walker; L Clifford McDonald; Leandris C Liburd; Jeffrey E Hall; Alicia M Fry; Aron J Hall; Neil Gupta; Wendi L Kuhnert; Paula W Yoon; Adi V Gundlapalli; Michael J Beach; Henry T Walke
Journal:  MMWR Morb Mortal Wkly Rep       Date:  2020-12-11       Impact factor: 17.586

6.  Tracking Changes in SARS-CoV-2 Spike: Evidence that D614G Increases Infectivity of the COVID-19 Virus.

Authors:  Bette Korber; Will M Fischer; Sandrasegaram Gnanakaran; Hyejin Yoon; James Theiler; Werner Abfalterer; Nick Hengartner; Elena E Giorgi; Tanmoy Bhattacharya; Brian Foley; Kathryn M Hastie; Matthew D Parker; David G Partridge; Cariad M Evans; Timothy M Freeman; Thushan I de Silva; Charlene McDanal; Lautaro G Perez; Haili Tang; Alex Moon-Walker; Sean P Whelan; Celia C LaBranche; Erica O Saphire; David C Montefiori
Journal:  Cell       Date:  2020-07-03       Impact factor: 66.850

  6 in total
  228 in total

1.  Fundamental evolution of all Orthocoronavirinae including three deadly lineages descendent from Chiroptera-hosted coronaviruses: SARS-CoV, MERS-CoV and SARS-CoV-2.

Authors:  Denis Jacob Machado; Rachel Scott; Sayal Guirales; Daniel A Janies
Journal:  Cladistics       Date:  2021-04-26       Impact factor: 5.254

2.  Multiplex SARS-CoV-2 Genotyping Reverse Transcriptase PCR for Population-Level Variant Screening and Epidemiologic Surveillance.

Authors:  Hannah Wang; Jacob A Miller; Michelle Verghese; Mamdouh Sibai; Daniel Solis; Kenji O Mfuh; Becky Jiang; Naomi Iwai; Marilyn Mar; ChunHong Huang; Fumiko Yamamoto; Malaya K Sahoo; James Zehnder; Benjamin A Pinsky
Journal:  J Clin Microbiol       Date:  2021-07-19       Impact factor: 5.948

3.  Epidemiology and genetic diversity of SARS-CoV-2 lineages circulating in Africa.

Authors:  Olayinka Sunday Okoh; Nicholas Israel Nii-Trebi; Abdulrokeeb Jakkari; Tosin Titus Olaniran; Tosin Yetunde Senbadejo; Anna Aba Kafintu-Kwashie; Emmanuel Oluwatobi Dairo; Tajudeen Oladunni Ganiyu; Ifiokakaninyene Ekpo Akaninyene; Louis Odinakaose Ezediuno; Idowu Jesulayomi Adeosun; Michael Asebake Ockiya; Esther Moradeyo Jimah; David J Spiro; Elijah Kolawole Oladipo; Nídia S Trovão
Journal:  medRxiv       Date:  2021-05-19

4.  Multiplex qPCR discriminates variants of concern to enhance global surveillance of SARS-CoV-2.

Authors:  Chantal B F Vogels; Mallery I Breban; Isabel M Ott; Tara Alpert; Mary E Petrone; Anne E Watkins; Chaney C Kalinich; Rebecca Earnest; Jessica E Rothman; Jaqueline Goes de Jesus; Ingra Morales Claro; Giulia Magalhães Ferreira; Myuki A E Crispim; Lavanya Singh; Houriiyah Tegally; Ugochukwu J Anyaneji; Emma B Hodcroft; Christopher E Mason; Gaurav Khullar; Jessica Metti; Joel T Dudley; Matthew J MacKay; Megan Nash; Jianhui Wang; Chen Liu; Pei Hui; Steven Murphy; Caleb Neal; Eva Laszlo; Marie L Landry; Anthony Muyombwe; Randy Downing; Jafar Razeq; Tulio de Oliveira; Nuno R Faria; Ester C Sabino; Richard A Neher; Joseph R Fauver; Nathan D Grubaugh
Journal:  PLoS Biol       Date:  2021-05-07       Impact factor: 9.593

Review 5.  Review of Current COVID-19 Diagnostics and Opportunities for Further Development.

Authors:  Yan Mardian; Herman Kosasih; Muhammad Karyana; Aaron Neal; Chuen-Yen Lau
Journal:  Front Med (Lausanne)       Date:  2021-05-07

6.  Modeling of Future COVID-19 Cases, Hospitalizations, and Deaths, by Vaccination Rates and Nonpharmaceutical Intervention Scenarios - United States, April-September 2021.

Authors:  Rebecca K Borchering; Cécile Viboud; Emily Howerton; Claire P Smith; Shaun Truelove; Michael C Runge; Nicholas G Reich; Lucie Contamin; John Levander; Jessica Salerno; Wilbert van Panhuis; Matt Kinsey; Kate Tallaksen; R Freddy Obrecht; Laura Asher; Cash Costello; Michael Kelbaugh; Shelby Wilson; Lauren Shin; Molly E Gallagher; Luke C Mullany; Kaitlin Rainwater-Lovett; Joseph C Lemaitre; Juan Dent; Kyra H Grantz; Joshua Kaminsky; Stephen A Lauer; Elizabeth C Lee; Hannah R Meredith; Javier Perez-Saez; Lindsay T Keegan; Dean Karlen; Matteo Chinazzi; Jessica T Davis; Kunpeng Mu; Xinyue Xiong; Ana Pastore Y Piontti; Alessandro Vespignani; Ajitesh Srivastava; Przemyslaw Porebski; Srinivasan Venkatramanan; Aniruddha Adiga; Bryan Lewis; Brian Klahn; Joseph Outten; James Schlitt; Patrick Corbett; Pyrros Alexander Telionis; Lijing Wang; Akhil Sai Peddireddy; Benjamin Hurt; Jiangzhuo Chen; Anil Vullikanti; Madhav Marathe; Jessica M Healy; Rachel B Slayton; Matthew Biggerstaff; Michael A Johansson; Katriona Shea; Justin Lessler
Journal:  MMWR Morb Mortal Wkly Rep       Date:  2021-05-14       Impact factor: 35.301

7.  Severe Acute Respiratory Syndrome Coronavirus 2: The Emergence of Important Genetic Variants and Testing Options for Clinical Laboratories.

Authors:  Blake W Buchan; Joseph D Yao
Journal:  Clin Microbiol Newsl       Date:  2021-05-21

Review 8.  COVID-19 in normal, diseased and transplanted liver.

Authors:  Alessandro Signorello; Ilaria Lenci; Martina Milana; Giuseppe Grassi; Leonardo Baiocchi
Journal:  World J Gastroenterol       Date:  2021-05-28       Impact factor: 5.742

9.  The UK Leicester COVID-19 'exceedance' May-July 2020: An analysis of hospitalised cases.

Authors:  Julian W Tang; Paul W Bird; Christopher W Holmes; Daniela C Nicoara; Gerrit Woltmann; Pranabashis Haldar; Nadine Holmes; Matthew Carlile; Christopher Moore; Patrick McClure; Matthew Loose
Journal:  J Infect       Date:  2021-05-29       Impact factor: 6.072

10.  Structural Analysis of the Novel Variants of SARS-CoV-2 and Forecasting in North America.

Authors:  Elena Quinonez; Majid Vahed; Abdolrazagh Hashemi Shahraki; Mehdi Mirsaeidi
Journal:  Viruses       Date:  2021-05-17       Impact factor: 5.048

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