Literature DB >> 33474459

Complete chloroplast genome sequence of Parnassia brevistyla (Celastraceae) and phylogenetic analysis with related species.

Mingze Xia1,2, Faqi Zhang1,3, Hua Rao4, Xiaofeng Chi1, Gulzar Khan1, Yu Zhang1,2, Jingya Yu1,2, Shilong Chen1.   

Abstract

The taxonomic status of Parnassia has been widely discussed, which has been placed in more than five families, Parnassiaceae, Droseraceae, Saxifragaceae, and Celastraceae. Due to the lack of reliable genetic data, we sequenced and analyzed P. brevistyla chloroplast genome for future genetic study. The complete chloroplast genomes of Parnassia brevistyla was sequenced with NovaSeq 6000. The full length of P. brevistyla chloroplast genomes is 151,728 bp. A total of 114 unique genes, including 30 tRNA genes, four rRNA genes, and 80 protein-coding genes were found in the chloroplast genome. Using the whole chloroplast genome sequences alignment of 10 species from Celastraceae and Saxifragaceae, the phylogenetic relationship was built. The phylogenetic position of P. brevistyla was closely clustered with Celastraceae. The complete chloroplast genome of P. brevistyla provides utility information for further research of phylogenetic relationship and taxonomic status of Parnassia.
© 2018 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group.

Entities:  

Keywords:  Celastraceae; Parnassia; Saxifragaceae; chloroplast genome; phylogenetic relationship

Year:  2018        PMID: 33474459      PMCID: PMC7800561          DOI: 10.1080/23802359.2018.1524725

Source DB:  PubMed          Journal:  Mitochondrial DNA B Resour        ISSN: 2380-2359            Impact factor:   0.658


  2 in total

1.  Disjunction and Vicariance Between East and West Asia: A Case Study on Euonymus sect. Uniloculares Based on Plastid Genome Analysis.

Authors:  Shayan Jamshed; Joo-Hwan Kim
Journal:  Front Plant Sci       Date:  2022-03-11       Impact factor: 5.753

2.  The complete chloroplast genome of Tripterygium wilfordii Hook. f. (Celastraceae).

Authors:  Yuan Zhong; Jingzheng Zhang; Zhenzhen Bao
Journal:  Mitochondrial DNA B Resour       Date:  2022-09-23       Impact factor: 0.610

  2 in total

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