| Literature DB >> 33474312 |
Kwang-Soo Cho1, Ji-Hong Cho1, Ju-Sung Im1, Jang-Gyu Choi1, Young-Eun Park1, Dong-Chil Jang1, Su-Young Hong1, Tae-Ho Park2.
Abstract
Solanum hougasii is a wild tuber-bearing species belonging to the family Solanaceae. The complete chloroplast genome of S. hougasii was constituted by de novo assembly, using a small amount of whole genome sequencing data. The chloroplast genome of S. hougasii was a circular DNA molecule with a length of 155,549 bp and consisted of 85,990 bp of large single copy, 18,373 bp of small single copy, and 25,593 bp of a pair of inverted repeat regions. A total of 158 genes were annotated, including 105 protein-coding genes, 45 tRNA genes, and eight rRNA genes. Maximum likelihood phylogenetic analysis with 25 Solanaceae species revealed that S. hougasii is most closely grouped with S. tuberosum.Entities:
Keywords: Chloroplast; Solanum hougasii; genome; genome sequence
Year: 2018 PMID: 33474312 PMCID: PMC7800044 DOI: 10.1080/23802359.2018.1491342
Source DB: PubMed Journal: Mitochondrial DNA B Resour ISSN: 2380-2359 Impact factor: 0.658