Literature DB >> 33474087

The mitochondrial genome of Atrocalopteryx melli Ris, 1912 (Zygoptera: Calopterygidae) via Ion Torrent PGM NGS sequencing.

Shaolin Xu1, Zhaoying Guan2, Qi Huang1, Lei Xu3, Andy Vierstraete4, Henri J Dumont1,4, Qiuqi Lin1.   

Abstract

The mitochondrial genome of Atrocalopteryx melli was sequenced and assembled via Next-Generation Sequencing (NGS) and iteratively assembly process with a reference seed. This genome is 15,562 bp long and A + T biased (71%), with 37 genes arranged in common order of Odonata. All protein-coding genes are initiated by typical "ATN" codon, and 9 genes are terminated with a complete stop codon, except nad4, nad5, cox2, and cox3, which are terminated with an incomplete codon "T(aa)". The S5 intergenic spacer is absent in this genome, supporting that lacking of S5 as a specific character for damselflies. The A + T rich region of A. melli is 267 bp longer than that of A. atrata. This mitogenome provides new molecular information for understanding of A. melli and Atrocalopteryx.
© 2018 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group.

Entities:  

Keywords:  Atrocalopteryx melli; NGS sequencing; damselflies; intergenic spacer; mitochondrial genome

Year:  2018        PMID: 33474087      PMCID: PMC7800031          DOI: 10.1080/23802359.2017.1413307

Source DB:  PubMed          Journal:  Mitochondrial DNA B Resour        ISSN: 2380-2359            Impact factor:   0.658


  2 in total

1.  The mitochondrial genome of Phyllodiaptomus tunguidus Shen & Tai, 1964 (Copepoda, Calanoida) and its phylogeny.

Authors:  Xiaoli Zhang; Shaolin Xu; Ping Liu; Qi Huang; Huiming Li; Henri J Dumont; Bo-Ping Han
Journal:  Mitochondrial DNA B Resour       Date:  2020-06-22       Impact factor: 0.658

2.  The mitochondrial genome of Diaphanosoma excisum Sars, 1885 (Crustacea: Branchiopoda: Cladocera) from Hainan Island, China.

Authors:  Jiaying Pan; Ping Liu; Franja Pajk; Henri J Dumont; Bo-Ping Han
Journal:  Mitochondrial DNA B Resour       Date:  2021-03-28       Impact factor: 0.658

  2 in total

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