| Literature DB >> 33473995 |
Yeisoo Yu1, Hyun-Oh Lee1, Joong Hyoun Chin2, Han Yong Park3, Soo-Cheul Yoo4.
Abstract
Rice (Oryza sativa) is the predominant staple food crop belonging to the Poaceae family. In this study, complete chloroplast genome sequence of O. sativa aus-type variety Nagina-22 was characterized through de novo assembly. The genome is a circular DNA molecule of 134,503 bp and has typical quadripartite structures including large single copy region (80,548 bp), small single copy region (12,347 bp), and a pair of inverted repeats (20,804 bp). A total of 120 genes were predicted in the genome, including 77 protein-coding genes, 8 open reading frame genes, 31 tRNA genes, and 4 rRNA genes. Phylogenetic analysis confirmed a close taxonomical relationship with O. sativa ssp. Indica species.Entities:
Keywords: N22; Nagina-22; Oryza sativa; Poaceae; aus-type; chloroplast genome
Year: 2017 PMID: 33473995 PMCID: PMC7800824 DOI: 10.1080/23802359.2017.1407710
Source DB: PubMed Journal: Mitochondrial DNA B Resour ISSN: 2380-2359 Impact factor: 0.658