Literature DB >> 33473983

The complete chloroplast genome sequence of Korean raspberry Rubus crataegifolius (Rosaceae).

Ji Young Yang1, Jae-Hong Pak1, Seung-Chul Kim2.   

Abstract

The first complete chloroplast genome sequences of Korean raspberry, oriental herbal medicinal plant of Korea, were reported in this study. The genome size was 155,714 bp, composed with one pair of inverted repeats (IRs) of 25,781 bp, which were separated by one large single copy (LSC; 85,402 bp) and one small single copy (SSC; 18,750 bp). The genome contained 131 genes, coding for 86 proteins, eight ribosomal RNAs, and 37 transfer RNAs. The overall GC content was 37.1%. Phylogenetic analysis suggests that R. crataegifolius is sister to R. corchorifolius, which belongs to subgenus Idaeobatus.
© 2017 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group.

Entities:  

Keywords:  Chloroplast genome; Korean raspberry; Rosaceae; Rubus crataegifolius

Year:  2017        PMID: 33473983      PMCID: PMC7799692          DOI: 10.1080/23802359.2017.1398621

Source DB:  PubMed          Journal:  Mitochondrial DNA B Resour        ISSN: 2380-2359            Impact factor:   0.658


  4 in total

1.  The complete chloroplast genome sequence of Rubus hirsutus Thunb. and a comparative analysis within Rubus species.

Authors:  Qirui Wang; Ziru Huang; Chenshu Gao; Yuqing Ge; Rubin Cheng
Journal:  Genetica       Date:  2021-09-21       Impact factor: 1.082

2.  Infrageneric Plastid Genomes of Cotoneaster (Rosaceae): Implications for the Plastome Evolution and Origin of C. wilsonii on Ulleung Island.

Authors:  JiYoung Yang; Seon-Hee Kim; Jae-Hong Pak; Seung-Chul Kim
Journal:  Genes (Basel)       Date:  2022-04-21       Impact factor: 4.141

3.  The complete chloroplast genome of Agrimonia pilosa Ledeb. isolated in Korea (Rosaceae): investigation of intraspecific variations on its chloroplast genomes.

Authors:  Kyeong-In Heo; Jongsun Park; Hong Xi; Juhyeon Min
Journal:  Mitochondrial DNA B Resour       Date:  2020-06-01       Impact factor: 0.658

4.  Complete chloroplast genomes of Rubus species (Rosaceae) and comparative analysis within the genus.

Authors:  Jiaojun Yu; Jun Fu; Yuanping Fang; Jun Xiang; Hongjin Dong
Journal:  BMC Genomics       Date:  2022-01-06       Impact factor: 3.969

  4 in total

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