Literature DB >> 33473951

The complete plastome sequences of Mangifera indica L. (Anacardiaceae).

Sangjin Jo1, Hoe-Won Kim1, Young-Kee Kim1, Jung-Yeon Sohn1, Se-Hwan Cheon1, Ki-Joong Kim1.   

Abstract

In this study, we determined the complete plastome sequence of Mangifera indica L. (Anacardiaceae) (NCBI acc. no. KX871231). The complete plastome is 157,780 bp in length, and consists of a large single copy of 86,673 bp and a small single copy of 18,349 bp, separated by two inverted repeats of 25,792 bp. The plastome contains 112 genes, of which 78 are protein-coding genes, 30 are tRNA genes, and four are rRNA genes. Sixteen genes contain one intron and two genes have two introns. The average A-T content of the plastome is 62.1%. The M. indica plastome has approximately 15 kb inversion between trnT-UGU and trnT-GGU. We identify a palindromic repeat of 18 bp (ATTCTTTTTTTTTTTTTT/AAAAAAAAAAAAAAGAAT) near the inversion breakpoints of M. indica plastome. Phylogenetic analysis revealed that M. indica is a sister group of Rhus chinensis with 100% bootstrap support. Anacardiaceae clade is a sister group of Boswellia sacra (Burseraceae) with 100% bootstrap support.
© 2017 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group.

Entities:  

Keywords:  Anacardiaceae; Mangifera indica; Plastome; large inversion; mango

Year:  2017        PMID: 33473951      PMCID: PMC7800470          DOI: 10.1080/23802359.2017.1390407

Source DB:  PubMed          Journal:  Mitochondrial DNA B Resour        ISSN: 2380-2359            Impact factor:   0.658


  2 in total

1.  Complete chloroplast genome of Myracrodruon urundeuva and its phylogenetics relationships in Anacardiaceae family.

Authors:  Bruno Cesar Rossini; Mario Luiz Teixeira de Moraes; Celso Luis Marino
Journal:  Physiol Mol Biol Plants       Date:  2021-04-11

2.  The complete chloroplast genome sequence of Mangifera sylvatica Roxb. (Anacardiaceae) and its phylogenetic analysis.

Authors:  Yu Zhang; Ke-Wei Ou; Guo-Di Huang; Ye-Fei Lu; Guo-Qian Yang; Xin-Hua Pang
Journal:  Mitochondrial DNA B Resour       Date:  2020-01-21       Impact factor: 0.658

  2 in total

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