Literature DB >> 33473940

Complete mitochondrial genomes for Cottus asper, Cottus perifretum, and Cottus rhenanus (Perciformes, Cottidae).

Kayla Fast1, Andres Aguilar2, Arne W Nolte3, Michael W Sandel1.   

Abstract

Freshwater sculpins represent a diverse but poorly-understood constituent of the Holarctic ichthyofauna. Sculpins are considered sensitive to pollution and habitat change, serving as aquatic bioindicators in ecotoxicology. Many species are protected by conservation agencies, due to anthropogenic activity within restricted geographic distributions. Here, we provide the first complete mitochondrial DNA sequences for three freshwater sculpins (Cottus asper, C. perifretum, C. rhenanus). These data are used to infer an updated mtDNA phylogeny for the genus Cottus, which supports results of previous research. These data are likely to be useful for future studies in biogeography, conservation, and functional genomics.
© 2017 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group.

Entities:  

Keywords:  Cottus asper; Cottus perifretum; Cottus rhenanus; Sculpin; mitochondrial genome

Year:  2017        PMID: 33473940      PMCID: PMC7800474          DOI: 10.1080/23802359.2017.1375870

Source DB:  PubMed          Journal:  Mitochondrial DNA B Resour        ISSN: 2380-2359            Impact factor:   0.658


  5 in total

1.  When invaders meet locally adapted types: rapid moulding of hybrid zones between sculpins (Cottus, Pisces) in the Rhine system.

Authors:  A W Nolte; J Freyhof; D Tautz
Journal:  Mol Ecol       Date:  2006-06       Impact factor: 6.185

2.  MEGA6: Molecular Evolutionary Genetics Analysis version 6.0.

Authors:  Koichiro Tamura; Glen Stecher; Daniel Peterson; Alan Filipski; Sudhir Kumar
Journal:  Mol Biol Evol       Date:  2013-10-16       Impact factor: 16.240

3.  Complete mitochondrial genomes for Icelus spatula, Aspidophoroides olrikii and Leptoclinus maculatus: pan-Arctic marine fishes from Canadian waters.

Authors:  Taylor Swanburg; John B Horne; Shauna Baillie; Stanley D King; Meghan C McBride; Michael P Mackley; Ian G Paterson; Ian R Bradbury; Paul Bentzen
Journal:  Mitochondrial DNA A DNA Mapp Seq Anal       Date:  2015-06-30       Impact factor: 1.514

4.  The complete mitochondrial genome of Cherskii's sculpin (Cottus czerskii) (Scorpaeniformes: Cottidae).

Authors:  Xiaomin Han; Cheng Li; Shuai Zhao; Chunzhu Xu
Journal:  Mitochondrial DNA A DNA Mapp Seq Anal       Date:  2015-05-29       Impact factor: 1.514

5.  Reconstructing mitochondrial genomes directly from genomic next-generation sequencing reads--a baiting and iterative mapping approach.

Authors:  Christoph Hahn; Lutz Bachmann; Bastien Chevreux
Journal:  Nucleic Acids Res       Date:  2013-05-09       Impact factor: 16.971

  5 in total

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