Literature DB >> 33473838

The complete chloroplast genome of Gentiana macrophylla.

Xiaofan Wang1, Na Yang1, Jiao Su1, Hui Zhang1, Xiaoyan Cao1.   

Abstract

Gentiana macrophylla is a perennial medicinal plant in the family Gentianaceae. Natural sources for G. macrophylla plants are being exhausted due to over-collection and need urgent conservation. The complete chloroplast DNA sequence of G. macrophylla (GenBank accession number: KY856959) was determined in our study. The size of chloroplast genome of G. macrophylla is 149,916 bp, including a large single-copy (LSC) region of 82,911 bp and a small single-copy (SSC) region of 17,095 bp separated by a pair of identical inverted repeat regions (IRs) of 24,955 bp each. A total of 130 genes were successfully annotated containing 86 protein-coding genes, 36 tRNA genes and 8 rRNA genes. The GC content is 37.7%. 33 chloroplast simple sequence repeats (cpSSRs) of Gentiana macrophylla were detected, in which 32 of them are mononucleotide repeats. Phylogenomic analysis strongly supported the close relationship of G. macrophylla and other 5 species in Gentiana.
© 2017 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group.

Entities:  

Keywords:  Chloroplast genome; Gentiana macrophylla; cpSSRs; phylogeny

Year:  2017        PMID: 33473838      PMCID: PMC7799622          DOI: 10.1080/23802359.2017.1347831

Source DB:  PubMed          Journal:  Mitochondrial DNA B Resour        ISSN: 2380-2359            Impact factor:   0.658


  1 in total

1.  Characterization of the complete chloroplast genome of orchid family species Cymbidium bicolor (Orchidaceae).

Authors:  Guojia Hu; Huijuan Zhou; Shuonxin Zhang; Peng Zhao
Journal:  Mitochondrial DNA B Resour       Date:  2019-12-18       Impact factor: 0.658

  1 in total

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