Literature DB >> 33473811

Complete mitochondrial genome of near threatened butter Catfish Ompok bimaculatus (Siluriformes: Siluridae).

Anindya Sundar Barman1, Mamta Singh1, Pramod Kumar Pandey1.   

Abstract

The complete mitochondrial genome of Ompok bimaculatus was obtained, using illumina high-throughput NextSeq 500 with 2 × 150 bp sequencing of mitochondrial DNA. The genome of O. bimaculatus was 16,482 bp in length (GenBank Accession No. KY887474) comprised of 13 protein-coding genes, 22 tRNA genes, 2 rRNA genes and a control region i.e. D-loop. In present mitogenome, 9 SSR were identified and validated in silico and secondary structures of all the 22 tRNA were predicted. The arrangement of genes was found identical to other siluriformes fish mitogenomes available in NCBI database. Phylogenetic relationship with closely related species were established which provide useful insights into taxonomic status of the species.
© 2017 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group.

Entities:  

Keywords:  O. bimaculatus; mitochondrial genome; phylogenetics

Year:  2017        PMID: 33473811      PMCID: PMC7799613          DOI: 10.1080/23802359.2017.1334520

Source DB:  PubMed          Journal:  Mitochondrial DNA B Resour        ISSN: 2380-2359            Impact factor:   0.658


  1 in total

1.  The first complete mitochondrial genome sequence of the korean endemic catfish Silurus microdorsalis (Actinopteri, Siluriformes, Siluridae).

Authors:  Chang Eon Park; Yeong-Jun Park; Min-Chul Kim; Min-Kyu Park; YeonGyun Jung; Seung-Dae Choi; YoungJae Jo; Gi-Ung Kang; Min-Ji Kim; Qing X Li; Brandon A Yoza; Kgu-Hwan Kim; Hee Cheon Park; Jae-Ho Shin
Journal:  Mitochondrial DNA B Resour       Date:  2019-12-13       Impact factor: 0.658

  1 in total

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