Literature DB >> 33473502

The complete chloroplast genome of Eclipta prostrata L. (Asteraceae).

Jee Young Park1, Yun Sun Lee1, Jin-Kyung Kim1, Hyun Oh Lee2, Hyun-Seung Park1, Sang-Choon Lee1, Jung Hwa Kang3, Taek Joo Lee3, Sang Hyun Sung4, Tae-Jin Yang1,5.   

Abstract

Eclipta prostrata is an herbal medicinal plant belonging to the Asteraceae family. In this study, complete chloroplast genome sequence of the E. prostrata was characterized by de novo assembly using whole genome sequence data. The genome of E. prostrata was 151,757 bp in length, which was composed of large single copy region of 83,285 bp, small single copy region of 18,346 bp and a pair of inverted repeat regions of 25,063 bp. The genome harboured 80 protein coding sequences, 30 tRNA genes and 4 rRNA genes. We confirmed close taxonomic relationship between E. prostrata and Helianthus annuus through phylogenetic analysis with chloroplast protein-coding genes.
© 2016 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group.

Entities:  

Keywords:  Chloroplast; Eclipta prostrata; genome sequence

Year:  2016        PMID: 33473502      PMCID: PMC7799467          DOI: 10.1080/23802359.2016.1176882

Source DB:  PubMed          Journal:  Mitochondrial DNA B Resour        ISSN: 2380-2359            Impact factor:   0.658


  2 in total

1.  The complete chloroplast genome of the invasive and Cd-hyperaccumulator herb Bidens pilosa L. (Asteraceae).

Authors:  Yu-Xiang Lin; Ren-Yan Duan; Zhi-Xiong Tan; Yin-Hua Ma; Hao Wu
Journal:  Mitochondrial DNA B Resour       Date:  2020-01-08       Impact factor: 0.658

2.  Extremely low nucleotide diversity among thirty-six new chloroplast genome sequences from Aldama (Heliantheae, Asteraceae) and comparative chloroplast genomics analyses with closely related genera.

Authors:  Benoit Loeuille; Verônica Thode; Carolina Siniscalchi; Sonia Andrade; Magdalena Rossi; José Rubens Pirani
Journal:  PeerJ       Date:  2021-02-24       Impact factor: 2.984

  2 in total

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