Literature DB >> 33473197

On-resin multicomponent protocols for biopolymer assembly and derivatization.

Daniel G Rivera1, Manuel G Ricardo2,3, Aldrin V Vasco3, Ludger A Wessjohann4, Erik V Van der Eycken5,6.   

Abstract

Solid-phase synthesis represents the methodological showcase for technological advances such as split-and-pool combinatorial chemistry and the automated synthesis of peptides, nucleic acids and polysaccharides. These strategies involve iterative coupling cycles that do not generate functional diversity besides that incorporated by the amino acids, nucleosides and monosaccharide building blocks. In sharp contrast, multicomponent reactions (MCRs) are traditionally used to generate both skeletal and appendage diversity in short, batchwise procedures. On-resin MCRs have traditionally been employed for the construction of heterocycle and peptidomimetic libraries, but that scenario has changed recently, and today the focus is more on the solid-phase derivatization of peptides and oligonucleotides. This review presents relevant experimental details and addresses the synthetic scope of such on-resin multicomponent protocols employed to accomplish specific biopolymer covalent modifications that are practically inviable by traditional solution-phase methodologies. Recommendations are provided to facilitate the implementation of solid-supported protocols and avoid possible pitfalls associated with the selection of the polymeric resin, the solvent and the order and amount of the reagents employed. We describe procedures comprising the multicomponent lipidation, biotinylation and labeling of both termini and the side chains, as well as the use of MCRs in the traceless on-resin synthesis of ligated and cyclic peptides. Solid-phase protocols for the assembly of α-helical and parallel β-sheet peptides as well as hybrid peptide-peptoid and peptide-peptide nucleic acid architectures are described. Finally, the solid-supported multicomponent derivatization of DNA oligonucleotides is illustrated as part of the DNA-encoded library technology relying on MCR-derived heterocyclic compounds.

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Year:  2021        PMID: 33473197     DOI: 10.1038/s41596-020-00445-6

Source DB:  PubMed          Journal:  Nat Protoc        ISSN: 1750-2799            Impact factor:   13.491


  58 in total

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Authors:  Peter H Seeberger
Journal:  Chem Soc Rev       Date:  2007-08-20       Impact factor: 54.564

Review 2.  Natural product synthesis using multicomponent reaction strategies.

Authors:  Barry B Touré; Dennis G Hall
Journal:  Chem Rev       Date:  2009-09       Impact factor: 60.622

Review 3.  Higher-order multicomponent reactions: beyond four reactants.

Authors:  Sebastian Brauch; Sander S van Berkel; Bernhard Westermann
Journal:  Chem Soc Rev       Date:  2013-06-21       Impact factor: 54.564

4.  Gene synthesis machines: DNA chemistry and its uses.

Authors:  M H Caruthers
Journal:  Science       Date:  1985-10-18       Impact factor: 47.728

Review 5.  Automated synthesis of peptides.

Authors:  R B Merrifield
Journal:  Science       Date:  1965-10-08       Impact factor: 47.728

6.  Introducing multicomponent reactions to polymer science: Passerini reactions of renewable monomers.

Authors:  Oliver Kreye; Tommy Tóth; Michael A R Meier
Journal:  J Am Chem Soc       Date:  2011-01-25       Impact factor: 15.419

7.  Automated solid-phase synthesis of oligosaccharides.

Authors:  O J Plante; E R Palmacci; P H Seeberger
Journal:  Science       Date:  2001-02-01       Impact factor: 47.728

8.  An automated multiplex oligonucleotide synthesizer: development of high-throughput, low-cost DNA synthesis.

Authors:  D A Lashkari; S P Hunicke-Smith; R M Norgren; R W Davis; T Brennan
Journal:  Proc Natl Acad Sci U S A       Date:  1995-08-15       Impact factor: 11.205

Review 9.  Synthesis and medical applications of oligosaccharides.

Authors:  Peter H Seeberger; Daniel B Werz
Journal:  Nature       Date:  2007-04-26       Impact factor: 49.962

Review 10.  Automated solid-phase peptide synthesis to obtain therapeutic peptides.

Authors:  Veronika Mäde; Sylvia Els-Heindl; Annette G Beck-Sickinger
Journal:  Beilstein J Org Chem       Date:  2014-05-22       Impact factor: 2.883

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  2 in total

Review 1.  Recent Advances in Macrocyclic Drugs and Microwave-Assisted and/or Solid-Supported Synthesis of Macrocycles.

Authors:  Dianqing Sun
Journal:  Molecules       Date:  2022-02-02       Impact factor: 4.411

Review 2.  Diketopiperazine Gels: New Horizons from the Self-Assembly of Cyclic Dipeptides.

Authors:  Marco Scarel; Silvia Marchesan
Journal:  Molecules       Date:  2021-06-03       Impact factor: 4.411

  2 in total

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