Literature DB >> 33467896

Inter-proteomic posttranslational modifications of the SARS-CoV-2 and the host proteins ‒ A new frontier.

Suresh Mishra1,2, Geetika Bassi2, Bl Grégoire Nyomba1.   

Abstract

Posttranslational modification of proteins, which include both the enzymatic alterations of protein side chains and main-chain peptide bond connectivity, is a fundamental regulatory process that is crucial for almost every aspects of cell biology, including the virus-host cell interaction and the SARS-CoV-2 infection. The posttranslational modification of proteins has primarily been studied in cells and tissues in an intra-proteomic context (where both substrates and enzymes are part of the same species). However, the inter-proteomic posttranslational modifications of most of the SARS-CoV-2 proteins by the host enzymes and vice versa are largely unexplored in virus pathogenesis and in the host immune response. It is now known that the structural spike (S) protein of the SARS-CoV-2 undergoes proteolytic priming by the host serine proteases for entry into the host cells, and N- and O-glycosylation by the host cell enzymes during virion packaging, which enable the virus to spread. New evidence suggests that both SARS-CoV-2 and the host proteins undergo inter-proteomic posttranslational modifications, which play roles in virus pathogenesis and infection-induced immune response by hijacking the host cell signaling. The purpose of this minireview is to bring attention of the scientific community to recent cutting-edge discoveries in this understudied area. It is likely that a better insight into the molecular mechanisms involved may open new research directions, and thereby contribute to novel therapeutic modality development against the SARS-CoV-2. Here we briefly discuss the rationale and touch upon some unanswered questions in this context, especially those that require attention from the scientific community.

Entities:  

Keywords:  Covid-19; host reaction; protein modifications; proteome

Mesh:

Substances:

Year:  2021        PMID: 33467896      PMCID: PMC8719024          DOI: 10.1177/1535370220986785

Source DB:  PubMed          Journal:  Exp Biol Med (Maywood)        ISSN: 1535-3699


  58 in total

1.  Diabetes-associated dysregulation of O-GlcNAcylation in rat cardiac mitochondria.

Authors:  Partha S Banerjee; Junfeng Ma; Gerald W Hart
Journal:  Proc Natl Acad Sci U S A       Date:  2015-04-27       Impact factor: 11.205

2.  Acetylated K676 TGFBIp as a severity diagnostic blood biomarker for SARS-CoV-2 pneumonia.

Authors:  Hee Ho Park; Hong Nam Kim; Hyelim Kim; Youngbum Yoo; Hyosoo Shin; Eun Young Choi; Jong-Sup Bae; Wonhwa Lee
Journal:  Sci Adv       Date:  2020-07-31       Impact factor: 14.136

3.  Patient Characteristics and Outcomes of 11 721 Patients With Coronavirus Disease 2019 (COVID-19) Hospitalized Across the United States.

Authors:  Michael W Fried; Julie M Crawford; Andrea R Mospan; Stephanie E Watkins; Breda Munoz; Richard C Zink; Sherry Elliott; Kyle Burleson; Charles Landis; K Rajender Reddy; Robert S Brown
Journal:  Clin Infect Dis       Date:  2021-05-18       Impact factor: 9.079

4.  Top-down Mass Spectrometry of Sarcomeric Protein Post-translational Modifications from Non-human Primate Skeletal Muscle.

Authors:  Yutong Jin; Gary M Diffee; Ricki J Colman; Rozalyn M Anderson; Ying Ge
Journal:  J Am Soc Mass Spectrom       Date:  2019-03-04       Impact factor: 3.262

Review 5.  Mass spectrometry-based detection and assignment of protein posttranslational modifications.

Authors:  Sophia Doll; Alma L Burlingame
Journal:  ACS Chem Biol       Date:  2015-01-16       Impact factor: 5.100

6.  SARS-CoV-2 (COVID-19) structural and evolutionary dynamicome: Insights into functional evolution and human genomics.

Authors:  Ruchir Gupta; Jacob Charron; Cynthia L Stenger; Jared Painter; Hunter Steward; Taylor W Cook; William Faber; Austin Frisch; Eric Lind; Jacob Bauss; Xiaopeng Li; Olivia Sirpilla; Xavier Soehnlen; Adam Underwood; David Hinds; Michele Morris; Neil Lamb; Joseph A Carcillo; Caleb Bupp; Bruce D Uhal; Surender Rajasekaran; Jeremy W Prokop
Journal:  J Biol Chem       Date:  2020-06-25       Impact factor: 5.157

7.  First flare of ACPA-positive rheumatoid arthritis after SARS-CoV-2 infection.

Authors:  Lea Perrot; Marie Hemon; Jean-Marc Busnel; Olivier Muis-Pistor; Christophe Picard; Christine Zandotti; Thao Pham; Jean Roudier; Sophie Desplat-Jego; Nathalie Balandraud
Journal:  Lancet Rheumatol       Date:  2020-11-23

Review 8.  Proteomic approaches to uncovering virus-host protein interactions during the progression of viral infection.

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Journal:  Expert Rev Proteomics       Date:  2016       Impact factor: 3.940

Review 9.  The SARS-CoV nucleocapsid protein: a protein with multifarious activities.

Authors:  Milan Surjit; Sunil K Lal
Journal:  Infect Genet Evol       Date:  2007-07-20       Impact factor: 3.342

10.  1H, 13C, and 15N backbone chemical shift assignments of the apo and the ADP-ribose bound forms of the macrodomain of SARS-CoV-2 non-structural protein 3b.

Authors:  F Cantini; L Banci; N Altincekic; J K Bains; K Dhamotharan; C Fuks; B Fürtig; S L Gande; B Hargittay; M Hengesbach; M T Hutchison; S M Korn; N Kubatova; F Kutz; V Linhard; F Löhr; N Meiser; D J Pyper; N S Qureshi; C Richter; K Saxena; A Schlundt; H Schwalbe; S Sreeramulu; J-N Tants; A Wacker; J E Weigand; J Wöhnert; A C Tsika; N K Fourkiotis; G A Spyroulias
Journal:  Biomol NMR Assign       Date:  2020-08-14       Impact factor: 0.746

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  3 in total

1.  A Path-Based Analysis of Infected Cell Line and COVID-19 Patient Transcriptome Reveals Novel Potential Targets and Drugs Against SARS-CoV-2.

Authors:  Piyush Agrawal; Narmada Sambaturu; Gulden Olgun; Sridhar Hannenhalli
Journal:  Front Immunol       Date:  2022-07-01       Impact factor: 8.786

Review 2.  The Lactate and the Lactate Dehydrogenase in Inflammatory Diseases and Major Risk Factors in COVID-19 Patients.

Authors:  G S Gupta
Journal:  Inflammation       Date:  2022-05-19       Impact factor: 4.657

3.  Open modification searching of SARS-CoV-2-human protein interaction data reveals novel viral modification sites.

Authors:  Charlotte Adams; Kurt Boonen; Kris Laukens; Wout Bittremieux
Journal:  Mol Cell Proteomics       Date:  2022-10-11       Impact factor: 7.381

  3 in total

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