Literature DB >> 33467883

Convergence of human pluripotent stem cell, organoid, and genome editing technologies.

Lin Wang1, Zhaohui Ye1, Yoon-Young Jang2.   

Abstract

The last decade has seen many exciting technological breakthroughs that greatly expanded the toolboxes for biological and biomedical research, yet few have had more impact than induced pluripotent stem cells and modern-day genome editing. These technologies are providing unprecedented opportunities to improve physiological relevance of experimental models, further our understanding of developmental processes, and develop novel therapies. One of the research areas that benefit greatly from these technological advances is the three-dimensional human organoid culture systems that resemble human tissues morphologically and physiologically. Here we summarize the development of human pluripotent stem cells and their differentiation through organoid formation. We further discuss how genetic modifications, genome editing in particular, were applied to answer basic biological and biomedical questions using organoid cultures of both somatic and pluripotent stem cell origins. Finally, we discuss the potential challenges of applying human pluripotent stem cell and organoid technologies for safety and efficiency evaluation of emerging genome editing tools.

Entities:  

Keywords:  CRISPR; Pluripotent stem cells; disease models; genome editing; organoid

Mesh:

Year:  2021        PMID: 33467883      PMCID: PMC8719032          DOI: 10.1177/1535370220985808

Source DB:  PubMed          Journal:  Exp Biol Med (Maywood)        ISSN: 1535-3699


  170 in total

1.  Generation of endoderm-derived human induced pluripotent stem cells from primary hepatocytes.

Authors:  Hua Liu; Zhaohui Ye; Yonghak Kim; Saul Sharkis; Yoon-Young Jang
Journal:  Hepatology       Date:  2010-05       Impact factor: 17.425

2.  Fast and efficient generation of knock-in human organoids using homology-independent CRISPR-Cas9 precision genome editing.

Authors:  Benedetta Artegiani; Delilah Hendriks; Joep Beumer; Rutger Kok; Xuan Zheng; Indi Joore; Susana Chuva de Sousa Lopes; Jeroen van Zon; Sander Tans; Hans Clevers
Journal:  Nat Cell Biol       Date:  2020-03-02       Impact factor: 28.824

3.  Generation of Human PSC-Derived Kidney Organoids with Patterned Nephron Segments and a De Novo Vascular Network.

Authors:  Jian Hui Low; Pin Li; Elaine Guo Yan Chew; Bingrui Zhou; Keiichiro Suzuki; Tian Zhang; Michelle Mulan Lian; Meng Liu; Emi Aizawa; Concepcion Rodriguez Esteban; Kylie Su Mei Yong; Qingfeng Chen; Josep M Campistol; Mingliang Fang; Chiea Chuen Khor; Jia Nee Foo; Juan Carlos Izpisua Belmonte; Yun Xia
Journal:  Cell Stem Cell       Date:  2019-07-11       Impact factor: 24.633

4.  Modeling Wnt signaling by CRISPR-Cas9 genome editing recapitulates neoplasia in human Barrett epithelial organoids.

Authors:  Xi Liu; Yulan Cheng; John M Abraham; Zhixiong Wang; Zhe Wang; Xiquan Ke; Rong Yan; Eun Ji Shin; Saowanee Ngamruengphong; Mouen A Khashab; Guanjun Zhang; George McNamara; Andrew J Ewald; DeChen Lin; Zhengwen Liu; Stephen J Meltzer
Journal:  Cancer Lett       Date:  2018-08-23       Impact factor: 8.679

5.  Targeted gene correction minimally impacts whole-genome mutational load in human-disease-specific induced pluripotent stem cell clones.

Authors:  Keiichiro Suzuki; Chang Yu; Jing Qu; Mo Li; Xiaotian Yao; Tingting Yuan; April Goebl; Senwei Tang; Ruotong Ren; Emi Aizawa; Fan Zhang; Xiuling Xu; Rupa Devi Soligalla; Feng Chen; Jessica Kim; Na Young Kim; Hsin-Kai Liao; Chris Benner; Concepcion Rodriguez Esteban; Yabin Jin; Guang-Hui Liu; Yingrui Li; Juan Carlos Izpisua Belmonte
Journal:  Cell Stem Cell       Date:  2014-07-03       Impact factor: 24.633

6.  Breaking the code of DNA binding specificity of TAL-type III effectors.

Authors:  Jens Boch; Heidi Scholze; Sebastian Schornack; Angelika Landgraf; Simone Hahn; Sabine Kay; Thomas Lahaye; Anja Nickstadt; Ulla Bonas
Journal:  Science       Date:  2009-12-11       Impact factor: 47.728

Review 7.  Stem Cells: A Renaissance in Human Biology Research.

Authors:  Jun Wu; Juan Carlos Izpisua Belmonte
Journal:  Cell       Date:  2016-06-16       Impact factor: 41.582

8.  Evaluation of variability in human kidney organoids.

Authors:  Belinda Phipson; Pei X Er; Alexander N Combes; Thomas A Forbes; Sara E Howden; Luke Zappia; Hsan-Jan Yen; Kynan T Lawlor; Lorna J Hale; Jane Sun; Ernst Wolvetang; Minoru Takasato; Alicia Oshlack; Melissa H Little
Journal:  Nat Methods       Date:  2018-12-20       Impact factor: 28.547

9.  In Vitro Induction and In Vivo Engraftment of Lung Bud Tip Progenitor Cells Derived from Human Pluripotent Stem Cells.

Authors:  Alyssa J Miller; David R Hill; Melinda S Nagy; Yoshiro Aoki; Briana R Dye; Alana M Chin; Sha Huang; Felix Zhu; Eric S White; Vibha Lama; Jason R Spence
Journal:  Stem Cell Reports       Date:  2017-12-14       Impact factor: 7.765

10.  SARS-CoV-2 targets neurons of 3D human brain organoids.

Authors:  Anand Ramani; Lisa Müller; Philipp N Ostermann; Elke Gabriel; Pranty Abida-Islam; Andreas Müller-Schiffmann; Aruljothi Mariappan; Olivier Goureau; Henning Gruell; Andreas Walker; Marcel Andrée; Sandra Hauka; Torsten Houwaart; Alexander Dilthey; Kai Wohlgemuth; Heymut Omran; Florian Klein; Dagmar Wieczorek; Ortwin Adams; Jörg Timm; Carsten Korth; Heiner Schaal; Jay Gopalakrishnan
Journal:  EMBO J       Date:  2020-09-23       Impact factor: 11.598

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  1 in total

1.  Editorial: Editor's Pick 2021: Highlights in Stem Cell Research.

Authors:  Valerie Kouskoff; Atsushi Asakura
Journal:  Front Cell Dev Biol       Date:  2022-03-25
  1 in total

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