Literature DB >> 33459870

Lung organoids: advances in generation and 3D-visualization.

Brian Cunniff1, Joseph E Druso1, Jos L van der Velden2.   

Abstract

The lung is comprised of more than 40 distinct cell types that support a complex 3-dimensional (3D) architecture that is required for efficient lung function. Loss of this proper architecture can accommodate and promote lung disease, highlighting researchers' growing need to analyze lung structures in detail. Additionally, in vivo cellular and molecular response to chemical and physical signals, along with the recapitulation of gene-expression patterns, can be lost during the transition from complex 3D tissues to 2D cell culture systems. Therefore, technologies that allow for the investigation of lung function under normal and disease states utilizing the entirety of the lung architecture are required to generate a complete understanding of these processes. Airway cell-derived organoids that can recapitulate lung structure and function ex vivo while being amenable to experimental manipulation, have provided a new and exciting model system to investigate lung biology. In this perspective, we discuss emerging technologies for culturing lung-derived organoids, techniques to visualize organoids using high-resolution microscopy and the resulting information extracted from organoids supporting research focused on lung function and diseases.

Entities:  

Keywords:  Advanced microscopy; Lung biology; Lung organoids; Organoid methodologies

Mesh:

Year:  2021        PMID: 33459870      PMCID: PMC7812034          DOI: 10.1007/s00418-020-01955-w

Source DB:  PubMed          Journal:  Histochem Cell Biol        ISSN: 0948-6143            Impact factor:   4.304


  36 in total

1.  Type 2 alveolar cells are stem cells in adult lung.

Authors:  Christina E Barkauskas; Michael J Cronce; Craig R Rackley; Emily J Bowie; Douglas R Keene; Barry R Stripp; Scott H Randell; Paul W Noble; Brigid L M Hogan
Journal:  J Clin Invest       Date:  2013-06-10       Impact factor: 14.808

2.  High-resolution 3D imaging of fixed and cleared organoids.

Authors:  Johanna F Dekkers; Maria Alieva; Lianne M Wellens; Hendrikus C R Ariese; Paul R Jamieson; Annelotte M Vonk; Gimano D Amatngalim; Huili Hu; Koen C Oost; Hugo J G Snippert; Jeffrey M Beekman; Ellen J Wehrens; Jane E Visvader; Hans Clevers; Anne C Rios
Journal:  Nat Protoc       Date:  2019-05-03       Impact factor: 13.491

Review 3.  Lung organoids: current uses and future promise.

Authors:  Christina E Barkauskas; Mei-I Chung; Bryan Fioret; Xia Gao; Hiroaki Katsura; Brigid L M Hogan
Journal:  Development       Date:  2017-03-15       Impact factor: 6.868

4.  A functional CFTR assay using primary cystic fibrosis intestinal organoids.

Authors:  Johanna F Dekkers; Caroline L Wiegerinck; Hugo R de Jonge; Inez Bronsveld; Hettie M Janssens; Karin M de Winter-de Groot; Arianne M Brandsma; Nienke W M de Jong; Marcel J C Bijvelds; Bob J Scholte; Edward E S Nieuwenhuis; Stieneke van den Brink; Hans Clevers; Cornelis K van der Ent; Sabine Middendorp; Jeffrey M Beekman
Journal:  Nat Med       Date:  2013-06-02       Impact factor: 53.440

5.  In vitro expansion of human gastric epithelial stem cells and their responses to bacterial infection.

Authors:  Sina Bartfeld; Tülay Bayram; Marc van de Wetering; Meritxell Huch; Harry Begthel; Pekka Kujala; Robert Vries; Peter J Peters; Hans Clevers
Journal:  Gastroenterology       Date:  2014-10-13       Impact factor: 22.682

6.  Challenges in Establishing Pure Lung Cancer Organoids Limit Their Utility for Personalized Medicine.

Authors:  Krijn K Dijkstra; Kim Monkhorst; Luuk J Schipper; Koen J Hartemink; Egbert F Smit; Sovann Kaing; Rosa de Groot; Monika C Wolkers; Hans Clevers; Edwin Cuppen; Emile E Voest
Journal:  Cell Rep       Date:  2020-05-05       Impact factor: 9.423

7.  A tunable refractive index matching medium for live imaging cells, tissues and model organisms.

Authors:  Tobias Boothe; Lennart Hilbert; Michael Heide; Lea Berninger; Wieland B Huttner; Vasily Zaburdaev; Nadine L Vastenhouw; Eugene W Myers; David N Drechsel; Jochen C Rink
Journal:  Elife       Date:  2017-07-14       Impact factor: 8.140

Review 8.  Pre-clinical Models for Studying the Interaction Between Mesenchymal Stromal Cells and Cancer Cells and the Induction of Stemness.

Authors:  Sofia Avnet; Silvia Lemma; Margherita Cortini; Gemma Di Pompo; Francesca Perut; Nicola Baldini
Journal:  Front Oncol       Date:  2019-04-30       Impact factor: 6.244

9.  Culture and establishment of self-renewing human and mouse adult liver and pancreas 3D organoids and their genetic manipulation.

Authors:  Laura Broutier; Amanda Andersson-Rolf; Christopher J Hindley; Sylvia F Boj; Hans Clevers; Bon-Kyoung Koo; Meritxell Huch
Journal:  Nat Protoc       Date:  2016-08-25       Impact factor: 13.491

10.  A three-dimensional model of human lung development and disease from pluripotent stem cells.

Authors:  Ya-Wen Chen; Sarah Xuelian Huang; Ana Luisa Rodrigues Toste de Carvalho; Siu-Hong Ho; Mohammad Naimul Islam; Stefano Volpi; Luigi D Notarangelo; Michael Ciancanelli; Jean-Laurent Casanova; Jahar Bhattacharya; Alice F Liang; Laura M Palermo; Matteo Porotto; Anne Moscona; Hans-Willem Snoeck
Journal:  Nat Cell Biol       Date:  2017-04-24       Impact factor: 28.824

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  4 in total

1.  In focus in HCB.

Authors:  Douglas J Taatjes; Jürgen Roth
Journal:  Histochem Cell Biol       Date:  2021-05-11       Impact factor: 4.304

2.  Introduction: 3D imaging in lung biology.

Authors:  Christian Mühlfeld; Douglas J Taatjes
Journal:  Histochem Cell Biol       Date:  2021-02       Impact factor: 4.304

Review 3.  Reconstructing the pulmonary niche with stem cells: a lung story.

Authors:  Barbie Varghese; Zihan Ling; Xi Ren
Journal:  Stem Cell Res Ther       Date:  2022-04-11       Impact factor: 6.832

Review 4.  Lung Organoids-The Ultimate Tool to Dissect Pulmonary Diseases?

Authors:  Veronika Bosáková; Marco De Zuani; Lucie Sládková; Zuzana Garlíková; Shyam Sushama Jose; Teresa Zelante; Marcela Hortová Kohoutková; Jan Frič
Journal:  Front Cell Dev Biol       Date:  2022-07-13
  4 in total

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