Literature DB >> 33458258

Fourier-Transform InfraRed (FT-IR) spectroscopy to show alterations in molecular composition of EV subpopulations from melanoma cell lines in different malignancy.

Ewa Ł Stępień1, Agnieszka Kamińska1, Magdalena Surman2, Dagmara Karbowska1, Andrzej Wróbel1, Małgorzata Przybyło2.   

Abstract

BACKGROUND: Melanoma cells release extracellular vesicles (EVs) subpopulations which differ in size, phenotype and molecular content. Melanoma derived EVs play a role in the development and progression of cancer by delivering surface receptors and bioactive (proteins, lipids, nucleic acids) or signaling molecules to target cells.
METHODS: We applied Fourier Transform Infrared Spectroscopy (FTIR) to compare infrared spectra of absorption for different subpopulations of EVs originating from normal human melanocytes, primary cutaneous melanoma (WM115) and metastatic cutaneous melanoma (WM266-4).
RESULTS: FTIR results showed that exosome and ectosome populations differ in content of protein and lipid components. We obtained higher lipid to protein ratio for ectosomes in comparison with exosomes what confirms that exosomes are very densely packed with protein cargo. We identified the lowest value of saturated fatty acids/unsaturated fatty acids parameter in the metastatic WM266-4 cell line and ectosomes derived from WM266-4 cell line in comparison with normal melanocytes and the primary WM115 cell line. We identified the alterations in the content of secondary structures of proteins present in EV subpopulations originating from melanocytes and melanoma cells in different malignancy.
CONCLUSIONS: Obtained results revealed differences in the molecular composition of melanoma derived EVs subtypes, including protein secondary structure, and showed progressive structural changes during cancer development.
© 2020 The Authors.

Entities:  

Keywords:  Extracellular vesicles; Fourier transform infrared spectroscopy; Melanoma; Protein secondary structure

Year:  2021        PMID: 33458258      PMCID: PMC7797365          DOI: 10.1016/j.bbrep.2020.100888

Source DB:  PubMed          Journal:  Biochem Biophys Rep        ISSN: 2405-5808


  45 in total

1.  Breast cancer detection by ATR-FTIR spectroscopy of blood serum and multivariate data-analysis.

Authors:  Vera E Sitnikova; Mariia A Kotkova; Tatiana N Nosenko; Tatiana N Kotkova; Daria M Martynova; Mayya V Uspenskaya
Journal:  Talanta       Date:  2020-02-24       Impact factor: 6.057

2.  Cell elasticity is an important indicator of the metastatic phenotype of melanoma cells.

Authors:  Michal Sarna; Andrzej Zadlo; Pawel Hermanowicz; Zbigniew Madeja; Kvetoslava Burda; Tadeusz Sarna
Journal:  Exp Dermatol       Date:  2014-10-10       Impact factor: 3.960

3.  Intrinsic disorder in cell-signaling and cancer-associated proteins.

Authors:  Lilia M Iakoucheva; Celeste J Brown; J David Lawson; Zoran Obradović; A Keith Dunker
Journal:  J Mol Biol       Date:  2002-10-25       Impact factor: 5.469

Review 4.  Metabolic strategies of melanoma cells: Mechanisms, interactions with the tumor microenvironment, and therapeutic implications.

Authors:  Grant M Fischer; Y N Vashisht Gopal; Jennifer L McQuade; Weiyi Peng; Ralph J DeBerardinis; Michael A Davies
Journal:  Pigment Cell Melanoma Res       Date:  2017-11-02       Impact factor: 4.693

5.  A mouse model of melanoma driven by oncogenic KRAS.

Authors:  Carla Milagre; Nathalie Dhomen; Felipe C Geyer; Robert Hayward; Maryou Lambros; Jorge S Reis-Filho; Richard Marais
Journal:  Cancer Res       Date:  2010-06-01       Impact factor: 12.701

6.  Melanoma diagnosis by Raman spectroscopy and neural networks: structure alterations in proteins and lipids in intact cancer tissue.

Authors:  Monika Gniadecka; Peter Alshede Philipsen; Sigurdur Sigurdsson; Sonja Wessel; Ole Faurskov Nielsen; Daniel Højgaard Christensen; Jana Hercogova; Kristian Rossen; Henrik Klem Thomsen; Robert Gniadecki; Lars Kai Hansen; Hans Christian Wulf
Journal:  J Invest Dermatol       Date:  2004-02       Impact factor: 8.551

Review 7.  Expanding the understanding of the heterogeneous nature of melanoma with bioinformatics and disorder-based proteomics.

Authors:  Mak B Djulbegovic; Vladimir N Uversky
Journal:  Int J Biol Macromol       Date:  2019-11-16       Impact factor: 6.953

Review 8.  Malignant Melanoma.

Authors:  Eshini Perera; Neiraja Gnaneswaran; Ross Jennens; Rodney Sinclair
Journal:  Healthcare (Basel)       Date:  2013-12-20

9.  Cell-derived extracellular vesicles can be used as a biomarker reservoir for glioblastoma tumor subtyping.

Authors:  Rosemary Lane; Thomas Simon; Marian Vintu; Benjamin Solkin; Barbara Koch; Nicolas Stewart; Graeme Benstead-Hume; Frances M G Pearl; Giles Critchley; Justin Stebbing; Georgios Giamas
Journal:  Commun Biol       Date:  2019-08-19

Review 10.  Exosomal lipid composition and the role of ether lipids and phosphoinositides in exosome biology.

Authors:  Tore Skotland; Nina P Hessvik; Kirsten Sandvig; Alicia Llorente
Journal:  J Lipid Res       Date:  2018-08-03       Impact factor: 5.922

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  4 in total

1.  Extracellular vesicles derived from microgreens of Raphanus sativus L. var. caudatus Alef contain bioactive macromolecules and inhibit HCT116 cells proliferation.

Authors:  Karnchanok Kaimuangpak; Kawintra Tamprasit; Kanjana Thumanu; Natthida Weerapreeyakul
Journal:  Sci Rep       Date:  2022-09-20       Impact factor: 4.996

Review 2.  Recent advances in optical label-free characterization of extracellular vesicles.

Authors:  Meruyert Imanbekova; Sorina Suarasan; Yao Lu; Sarah Jurchuk; Sebastian Wachsmann-Hogiu
Journal:  Nanophotonics       Date:  2022-04-13       Impact factor: 7.923

3.  FT-IR Spectral Signature of Sensitive and Multidrug-Resistant Osteosarcoma Cell-Derived Extracellular Nanovesicles.

Authors:  Francesca Perut; Gabriela Graziani; Laura Roncuzzi; Nicoletta Zini; Sofia Avnet; Nicola Baldini
Journal:  Cells       Date:  2022-02-23       Impact factor: 6.600

4.  Machine Learning-Assisted FTIR Analysis of Circulating Extracellular Vesicles for Cancer Liquid Biopsy.

Authors:  Riccardo Di Santo; Maria Vaccaro; Sabrina Romanò; Flavio Di Giacinto; Massimiliano Papi; Gian Ludovico Rapaccini; Marco De Spirito; Luca Miele; Umberto Basile; Gabriele Ciasca
Journal:  J Pers Med       Date:  2022-06-10
  4 in total

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