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Literature DB >> 33458244

The complete mitochondrial genome of Anoplistes halodendri (Coleoptera: Cerambycidae).

Bairong Lin¹, Rong Deng^2,3, Jiayi Ma^2,3, Xiaoqian Weng^2,3, Xiong Guan¹.

Abstract

In this study, we report the complete mitochondrial genome of Anoplistes halodendri, which covers a total of 15,697 bp in length with 28.27% GC content. The complete mitochondrial genome is composed of 12 protein-coding genes (PCGs) and also contains 22 transfer RNA genes (tRNAs) and two ribosomal RNA genes (rRNAs). Phylogenetic analysis of the A. halodendri with other 21 different species of Cerambycidae indicated that A. halodendri formed an isolated clade and belong to Cerambycinae. The results will be helpful to study the evolutionary relationship among the subfamilies of Cerambycidae.

Entities: Chemical

Keywords: Anoplistes halodendri; Complete mitochondrial genome; phylogenetic analysis

Year: 2020 PMID： 33458244 PMCID： PMC7782932 DOI： 10.1080/23802359.2020.1850218

Source DB: PubMed Journal: Mitochondrial DNA B Resour ISSN： 2380-2359 Impact factor: 0.658

7 in total

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Authors: Robert C Edgar
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Authors: Lech Karpiński; Wojciech T Szczepański; Radosław Lewa; Marcin Walczak; Jacek Hilszczański; Lech Kruszelnicki; Krzysztof Łoś; Tomasz Jaworski; Grzegorz Tarwacki
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7. The complete mitochondrial genomes of five longicorn beetles (Coleoptera: Cerambycidae) and phylogenetic relationships within Cerambycidae.

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Journal: PeerJ Date: 2019-09-05 Impact factor: 2.984

7 in total

The complete mitochondrial genome of Anoplistes halodendri (Coleoptera: Cerambycidae).

1. MUSCLE: multiple sequence alignment with high accuracy and high throughput.

2. New data on the distribution, biology and ecology of the longhorn beetles from the area of South and East Kazakhstan (Coleoptera, Cerambycidae).

3. MITOS: improved de novo metazoan mitochondrial genome annotation.

4. IQ-TREE: a fast and effective stochastic algorithm for estimating maximum-likelihood phylogenies.

5. metaSPAdes: a new versatile metagenomic assembler.

6. fastp: an ultra-fast all-in-one FASTQ preprocessor.

7. The complete mitochondrial genomes of five longicorn beetles (Coleoptera: Cerambycidae) and phylogenetic relationships within Cerambycidae.