Literature DB >> 33458188

The complete chloroplast genome sequence of Acanthopanax trifoliatus (Linn.) Merr.

Jingyu Li1, Fang Zhou1, Yu Mei1, Yan Gu1, Shiqang Xu1, Shike Cai1, Mingyang Sun1, Jihua Wang1.   

Abstract

Acanthopanax trifoliatus (Linn.) Merr. is an edible vegetables and medicinal plant from Asian countries. In this study, the complete chloroplast genome of A. trifoliatus was assembled and annotated by high-throughput sequencing. The total chloroplast genome size of A. trifoliatus was 156,716 bp, containing a large single-copy (LSC) region of 86,672 bp, a small single-copy (SSC) region of 18,174 bp, and a pair of inverted repeat regions of 25,935 bp. A total of 134 genes were predicted in the chloroplast genome of A. trifoliatus, including 89 protein-coding genes, 37 tRNA genes, and 8 rRNA genes. Phylogenetic analysis showed that A. trifoliatus was closely related to Eleutherococcus gracilistylus.
© 2020 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group.

Entities:  

Keywords:  Acanthopanax trifoliatus (Linn.) Merr.; chloroplast genome; medical plant

Year:  2020        PMID: 33458188      PMCID: PMC7781875          DOI: 10.1080/23802359.2020.1823900

Source DB:  PubMed          Journal:  Mitochondrial DNA B Resour        ISSN: 2380-2359            Impact factor:   0.658


  4 in total

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Journal:  Food Funct       Date:  2019-07-30       Impact factor: 5.396

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Journal:  Bioinformatics       Date:  2014-01-21       Impact factor: 6.937

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Journal:  Nucleic Acids Res       Date:  2017-07-03       Impact factor: 16.971

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Authors:  Jian-Jun Jin; Wen-Bin Yu; Jun-Bo Yang; Yu Song; Claude W dePamphilis; Ting-Shuang Yi; De-Zhu Li
Journal:  Genome Biol       Date:  2020-09-10       Impact factor: 13.583

  4 in total

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