Literature DB >> 33458173

Characterization of the complete mitochondrial genome of Chinese Konosirus punctatus (Clupeiformes, Clupeidae) and phylogenetic studies of Clupeiformes.

Kun Zhang1, Yifan Liu1, Xiaolong Yin2, Pengxiang Yuan3, Jian Chen1, Yuanpei Gao3, Hongling Ping1, Hua Zhang4, Zengliang Miao1, Bingjian Liu1,4, Pinglin Cao1.   

Abstract

The Dotted Gizzard Shad (Konosirus punctatus) was one of the most important commercial fish species in China, Japan and Korea. In this study, the complete mitochondrial genome of K. punctatus was presented. The full length of the mitochondrial genome was 16,705 bp, including 13 protein-coding genes (PCGs), two ribosomal RNAs, 22 transfer RNA genes, one non-coding control region (CR) and one origin of replication on the light-strand. The total nucleotide composition of mitochondrial DNA was 25.79%A, 25.09%T, 29.05%C, 20.08%G, and AT was 50.88%. The mitochondrial genome provides an important resource for solving taxonomic problems and studying molecular evolution.
© 2020 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group.

Entities:  

Keywords:  Characiformes; Konosirus punctatus; mitochondrial genome; phylogenetic analysis

Year:  2020        PMID： 33458173      PMCID： PMC7782019          DOI： 10.1080/23802359.2020.1823272

Source DB:  PubMed          Journal:  Mitochondrial DNA B Resour        ISSN： 2380-2359            Impact factor:   0.658


  10 in total

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Journal:  Nucleic Acids Res       Date:  1999-04-15       Impact factor: 16.971

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4.  tRNAscan-SE: a program for improved detection of transfer RNA genes in genomic sequence.

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Journal:  Nucleic Acids Res       Date:  1997-03-01       Impact factor: 16.971

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Authors:  K Yamaoka; T Nakagawa; T Uno
Journal:  J Pharmacokinet Biopharm       Date:  1978-04

6.  Complete mitochondrial genome of the grass carp (Ctenopharyngodon idella, Teleostei): insight into its phylogenic position within Cyprinidae.

Authors:  Chenghui Wang; Qin Chen; Guoqing Lu; Jiawei Xu; Qinling Yang; Sifa Li
Journal:  Gene       Date:  2008-07-18       Impact factor: 3.688

7.  Mitogenomic evidence for an Indo-West Pacific origin of the Clupeoidei (Teleostei: Clupeiformes).

Authors:  Sébastien Lavoué; Masaki Miya; Prachya Musikasinthorn; Wei-Jen Chen; Mutsumi Nishida
Journal:  PLoS One       Date:  2013-02-19       Impact factor: 3.240

8.  MrBayes 3.2: efficient Bayesian phylogenetic inference and model choice across a large model space.

Authors:  Fredrik Ronquist; Maxim Teslenko; Paul van der Mark; Daniel L Ayres; Aaron Darling; Sebastian Höhna; Bret Larget; Liang Liu; Marc A Suchard; John P Huelsenbeck
Journal:  Syst Biol       Date:  2012-02-22       Impact factor: 15.683

9.  Complete mitochondrial genome and the phylogenetic position of the tigertooth croaker Otolithes ruber (Perciformes: Sciaenidae).

Authors:  Chang-Chang Guo; Min Liu; Jian-Jie Lin; Fang-Qun Dai
Journal:  Mitochondrial DNA B Resour       Date:  2017-02-23       Impact factor: 0.658

10.  The complete mitochondrial genome of Chaetodon octofasciatus (Perciformes: Chaetodontidae) and phylogenetic studies of Percoidea.

Authors:  Kehua Zhu; Li Gong; Zhenming Lü; Liqin Liu; Lihua Jiang; Bingjian Liu
Journal:  Mitochondrial DNA B Resour       Date:  2018-04-27       Impact factor: 0.658
  10 in total
  2 in total

1.  The complete mitochondrial genome of Scapania ampliata Steph., 1897 (Scapaniaceae, Jungermanniales).

Authors:  Seung Se Choi; Juhyeon Min; Woochan Kwon; Jongsun Park
Journal:  Mitochondrial DNA B Resour       Date:  2021-03-01       Impact factor: 0.658

2.  Characterization of the complete mitogenome of Gymnocypris dobula (Günther, 1868) (Cypriniformes: Cyprinidae).

Authors:  Jiasheng Li; Shiyi Chen; Tashi Lahm; Ying Peng; Haodi Shen; Kun Zhang; Wenhua Huang; Xudong Liang; Bingjian Liu; Meiqun Chen
Journal:  Mitochondrial DNA B Resour       Date:  2022-01-30       Impact factor: 0.658
  2 in total

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