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Literature DB >> 33458164

Complete mitochondrial genome sequence of Japanese forest green tree frog (Rhacophorus arboreus).

Hidetoshi Inagaki¹, Yoshikazu Haramoto², Hiroshi Y Kubota³, Yasushi Shigeri⁴.

Abstract

We determined the complete mitochondrial genome sequence of the Japanese forest green tree frog (Rhacophorus arboreus). The mitochondrial genome is 22,236 bp in length, which encodes 13 protein-coding genes, 2 rRNA, and 22 tRNA genes, and two control regions (D-loops). The whole gene arrangement of R. arboreus was the same as that of Rhacophorus omeimontis and Rhacophorus schlegelii.

Entities: CellLine Species

Keywords: Mitochondrial genome; Rhacophorus arboreus

Year: 2020 PMID： 33458164 PMCID： PMC7782537 DOI： 10.1080/23802359.2020.1820396

Source DB: PubMed Journal: Mitochondrial DNA B Resour ISSN： 2380-2359 Impact factor: 0.658

6 in total

1. Velvet: algorithms for de novo short read assembly using de Bruijn graphs.

Authors: Daniel R Zerbino; Ewan Birney
Journal: Genome Res Date: 2008-03-18 Impact factor: 9.043

2. MEGA X: Molecular Evolutionary Genetics Analysis across Computing Platforms.

Authors: Sudhir Kumar; Glen Stecher; Michael Li; Christina Knyaz; Koichiro Tamura
Journal: Mol Biol Evol Date: 2018-06-01 Impact factor: 16.240

3. Complete nucleotide sequence of the mitochondrial genome of Schlegel's tree frog Rhacophorus schlegelii (family Rhacophoridae): duplicated control regions and gene rearrangements.

Authors: Naomi Sano; Atsushi Kurabayashi; Tamotsu Fujii; Hiromichi Yonekawa; Masayuki Sumida
Journal: Genes Genet Syst Date: 2005-06 Impact factor: 1.517

Complete mitochondrial genome sequence of Japanese forest green tree frog (Rhacophorus arboreus).

1. Velvet: algorithms for de novo short read assembly using de Bruijn graphs.

2. MEGA X: Molecular Evolutionary Genetics Analysis across Computing Platforms.

3. Complete nucleotide sequence of the mitochondrial genome of Schlegel's tree frog Rhacophorus schlegelii (family Rhacophoridae): duplicated control regions and gene rearrangements.

4. The complete mitochondrial genome of Rhacophorus dennysi (Anura: Rhacophoridae) and phylogenetic analysis.

5. MITOS: improved de novo metazoan mitochondrial genome annotation.

6. The complete mitochondrial genome of Omei Treefrog (Rhacophorus omeimontis).