Literature DB >> 33458134

Characterization of the complete chloroplast genome of ornamental plant, Bougainvillea peruviana (Nyctaginaceae).

Guofeng Liu1, Shiou Yih Lee2, Xing Hu1, Miaomiao Sun1, Jianzhong Ni1, Wei Wang1, Seping Dai1, Lin Ruan1.   

Abstract

Bougainvillea peruviana is a widely domesticated ornamental plant species. However, studies on B. peruviana are limited. In this study, we reported the complete chloroplast (cp) genome of B. peruviana. The cp genome is 154,465 bp in length, containing a large single-copy (LSC) of 85,563 bp and a small single-copy (SSC) of 18,050 bp, which are separated by a pair of inverted repeats (IRs) of 25,426 bp, each. A total of 132 genes, including 86 protein-coding genes, 38 tRNA genes, and eight rRNA genes, were predicted. The overall GC content for the cp genome is 36.5%. The maximum-likelihood tree constructed based on cp genome sequences showed that B. peruviana is placed under Nyctaginaceae and is diverged before Bougainvillea glabra and Bougainvillea spectabilis under strong bootstrap support.
© 2020 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group.

Entities:  

Keywords:  Bougainvillea; Illumina sequencing; chloroplast genome; landscaping; ornamental

Year:  2020        PMID: 33458134      PMCID: PMC7782202          DOI: 10.1080/23802359.2020.1768948

Source DB:  PubMed          Journal:  Mitochondrial DNA B Resour        ISSN: 2380-2359            Impact factor:   0.658


  3 in total

1.  GeSeq - versatile and accurate annotation of organelle genomes.

Authors:  Michael Tillich; Pascal Lehwark; Tommaso Pellizzer; Elena S Ulbricht-Jones; Axel Fischer; Ralph Bock; Stephan Greiner
Journal:  Nucleic Acids Res       Date:  2017-07-03       Impact factor: 16.971

2.  NOVOPlasty: de novo assembly of organelle genomes from whole genome data.

Authors:  Nicolas Dierckxsens; Patrick Mardulyn; Guillaume Smits
Journal:  Nucleic Acids Res       Date:  2017-02-28       Impact factor: 16.971

Review 3.  Bougainvillea Genus: A Review on Phytochemistry, Pharmacology, and Toxicology.

Authors:  Rodolfo Abarca-Vargas; Vera L Petricevich
Journal:  Evid Based Complement Alternat Med       Date:  2018-06-24       Impact factor: 2.629

  3 in total

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