Literature DB >> 33458130

The complete chloroplast genome sequence of Butea monosperma (Fabaceae).

Dan Wei1, Xiaogang Ding1, Hangyong Zhu1, Zhongrui Zhang1, Haiyan Yang1, Renchao Zhou2, Seping Dai3, Geng Zhang1.   

Abstract

Butea monosperma, an importantmedicinal plantin Fabaceae, is mainly distributed in southern Asia. In this study, we reported the complete chloroplast (cp) genome of B. monosperma assembled with Illumina sequencing data. The whole cp genome of this species is 151,925 bp in length, consisting of two inverted repeat regions (IR, 25,083 bp), one large single-copy region (LSC, 83,541 bp), and one small single-copy region (SSC, 18,218 bp).A total of 128 genes were annotated for the chloroplast genome, including 83 protein-coding genes, 37 tRNAs and 8 rRNAs. Phylogenetic analysis indicated that B. monosperma was closely related to the genus Lespedeza.
© 2020 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group.

Entities:  

Keywords:  Butea monosperma; complete cp genome;automated assembly; medicine

Year:  2020        PMID: 33458130      PMCID: PMC7781871          DOI: 10.1080/23802359.2020.1811173

Source DB:  PubMed          Journal:  Mitochondrial DNA B Resour        ISSN: 2380-2359            Impact factor:   0.658


  6 in total

1.  Breast cancer amelioration by Butea monosperma in-vitro and in-vivo.

Authors:  Prachi Karia; Kirti V Patel; Shri S P Rathod
Journal:  J Ethnopharmacol       Date:  2018-01-31       Impact factor: 4.360

2.  Antibacterial and antidiarrheal activity of Butea Monospermea bark extract against waterborne enterobacter Cloacae in rodents: In-vitro, Ex-vivo and In-Vivo evidences.

Authors:  Divya Sharma; Saraswati Patel; Kanika Verma; Shiva Gudlawar; Dipjyoti Chakraborty; Sarvesh Paliwal; Jaya Dwivedi; Swapnil Sharma
Journal:  J Ethnopharmacol       Date:  2019-06-07       Impact factor: 4.360

3.  MAFFT multiple sequence alignment software version 7: improvements in performance and usability.

Authors:  Kazutaka Katoh; Daron M Standley
Journal:  Mol Biol Evol       Date:  2013-01-16       Impact factor: 16.240

4.  RAxML version 8: a tool for phylogenetic analysis and post-analysis of large phylogenies.

Authors:  Alexandros Stamatakis
Journal:  Bioinformatics       Date:  2014-01-21       Impact factor: 6.937

5.  GeSeq - versatile and accurate annotation of organelle genomes.

Authors:  Michael Tillich; Pascal Lehwark; Tommaso Pellizzer; Elena S Ulbricht-Jones; Axel Fischer; Ralph Bock; Stephan Greiner
Journal:  Nucleic Acids Res       Date:  2017-07-03       Impact factor: 16.971

6.  GetOrganelle: a fast and versatile toolkit for accurate de novo assembly of organelle genomes.

Authors:  Jian-Jun Jin; Wen-Bin Yu; Jun-Bo Yang; Yu Song; Claude W dePamphilis; Ting-Shuang Yi; De-Zhu Li
Journal:  Genome Biol       Date:  2020-09-10       Impact factor: 13.583

  6 in total

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