Literature DB >> 33458105

The complete mitochondrial genome of the yellowfin shiner, Notropis lutipinnis.

Karen E Bobier1.   

Abstract

The complete mitochondrial genome of the yellowfin shiner (Notropis lutipinnis) 16,706 bp and contained 13 protein coding genes, 2 rRNAs, 22tRNAs, and one control region. The overall base composition was A (28.8%), T (27.0%), C (26.7%), G (17.5%). Phylogenetics analyses of N. Lutipinnis and 29 closely related species found discrepancies between genetic relationships and taxonomic delineations, highlighting the need for further studies of phylogenetic and biogeographic relationships among the closely related taxa of the subfamily Pogonichthyinae.
© 2020 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group.

Entities:  

Keywords:  Mitochondrial genome; Notropis lutipinnis; phylogenetic analysis

Year:  2020        PMID： 33458105      PMCID： PMC7782857          DOI： 10.1080/23802359.2020.1809541

Source DB:  PubMed          Journal:  Mitochondrial DNA B Resour        ISSN： 2380-2359            Impact factor:   0.658


  9 in total

Review 1.  Transcription and replication of mitochondrial DNA.

Authors:  D A Clayton
Journal:  Hum Reprod       Date:  2000-07       Impact factor: 6.918

2.  MUSCLE: multiple sequence alignment with high accuracy and high throughput.

Authors:  Robert C Edgar
Journal:  Nucleic Acids Res       Date:  2004-03-19       Impact factor: 16.971

3.  The main features of the craniate mitochondrial DNA between the ND1 and the COI genes were established in the common ancestor with the lancelet.

Authors:  C Delarbre; V Barriel; S Tillier; P Janvier; G Gachelin
Journal:  Mol Biol Evol       Date:  1997-08       Impact factor: 16.240

4.  Phylogenetic relationships of the North American cyprinid subgenus Hydrophlox.

Authors:  Mollie F Cashner; Kyle R Piller; Henry L Bart
Journal:  Mol Phylogenet Evol       Date:  2011-03-21       Impact factor: 4.286

5.  RIVER CAPTURE IN THE TALLULAH DISTRICT, GEORGIA.

Authors:  D W Johnson
Journal:  Science       Date:  1907-03-15       Impact factor: 47.728

6.  Phylogenetic relationships and classification of the Holarctic family Leuciscidae (Cypriniformes: Cyprinoidei).

Authors:  Susana Schönhuth; Jasna Vukić; Radek Šanda; Lei Yang; Richard L Mayden
Journal:  Mol Phylogenet Evol       Date:  2018-06-18       Impact factor: 4.286

7.  tRNA punctuation model of RNA processing in human mitochondria.

Authors:  D Ojala; J Montoya; G Attardi
Journal:  Nature       Date:  1981-04-09       Impact factor: 49.962

8.  RAxML version 8: a tool for phylogenetic analysis and post-analysis of large phylogenies.

Authors:  Alexandros Stamatakis
Journal:  Bioinformatics       Date:  2014-01-21       Impact factor: 6.937

9.  MitoFish and MitoAnnotator: a mitochondrial genome database of fish with an accurate and automatic annotation pipeline.

Authors:  Wataru Iwasaki; Tsukasa Fukunaga; Ryota Isagozawa; Koichiro Yamada; Yasunobu Maeda; Takashi P Satoh; Tetsuya Sado; Kohji Mabuchi; Hirohiko Takeshima; Masaki Miya; Mutsumi Nishida
Journal:  Mol Biol Evol       Date:  2013-08-16       Impact factor: 16.240
  9 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.