Literature DB >> 33458060

The complete chloroplast genome sequence of Lirianthe hodgsonii, a tree species of Magnoliaceae as least concern.

Shao-Yu Chen1, Tao Wu1, Hui-Fen Ma1, Yu-Pin Fu1, Yun-Feng Zhu1, Jia-Bo Hao1, Hong Jiang1, Yong-Kang Sima1.   

Abstract

Lirianthe hodgsonii is a tree species of Magnoliaceae as least concern. In the present paper, the complete chloroplast genome (cpDNA) and basic annotated information of L. hodgsonii were reported and its phylogenetic relationship with other species in Magnoliaceae was analyzed. The size of its complete cpDNA is 159,693 bp, with a typical quadripartite structure comprising a pair of inverted repeat (IR) regions of 26,546 bp, a large single-copy (LSC) region of 87,848 bp and a small single-copy (SSC) region of 18,753 bp. The genome contains 131 unique genes, including 86 protein-coding genes, 37 tRNA genes, and 8 rRNA genes. The phylogenetic analysis showed that L. hodgsonii is affinal to Lirianthe bidoupensis and they form a monophyletic group with other seven Lirianthe species. This Lirianthe clade is sister to the Dugandiodendron and Talauma clade with high support. All genera mentioned in this analysis are monophyletic under the system of Magnoliaceae by Sima and Lu.
© 2020 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group.

Entities:  

Keywords:  Lirianthe hodgsonii (J. D. Hooker & Thomson) Sima & S. G. Lu; Magnoliaceae; complete chloroplast genome; phylogenetic analysis

Year:  2020        PMID: 33458060      PMCID: PMC7781970          DOI: 10.1080/23802359.2020.1798296

Source DB:  PubMed          Journal:  Mitochondrial DNA B Resour        ISSN: 2380-2359            Impact factor:   0.658


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