Literature DB >> 33458053

Characterization of the complete mitochondrial genome of Morchella eohespera.

Wei Sa1, Qian-Han Shang1, Ting Yang2, Qi-Yuan Gao2, Mi-Li Liu2, Jian Liang1, Zhong-Hu Li2.   

Abstract

Morchella eohespera Beug, Voitk & O'Donnell is a typical black morel species. In this study, using the Nanopore sequencing platform, we characterized its whole mitochondrial (mt) genome sequence. Mt genome of M. eohespera is composed of circular DNA molecules of 243,963 bp, which encoded 102 protein-coding genes (PCGs), two ribosomal RNA genes (rRNA), and 31 transfer RNA (tRNA) genes. The base composition of M. eohespera mitogenome is as follows: A (30.40%), T (29.30%), G (20.8%), and C (19.5%). The phylogenetic analysis suggested that M. eohespera was closely related to the congeneric M. importuna.
© 2020 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group.

Entities:  

Keywords:  Morchella eohespera; mitochondrial genome; phylogenetic relationship

Year:  2020        PMID： 33458053      PMCID： PMC7782286          DOI： 10.1080/23802359.2020.1797559

Source DB:  PubMed          Journal:  Mitochondrial DNA B Resour        ISSN： 2380-2359            Impact factor:   0.658


  6 in total

1.  MAFFT: a novel method for rapid multiple sequence alignment based on fast Fourier transform.

Authors:  Kazutaka Katoh; Kazuharu Misawa; Kei-ichi Kuma; Takashi Miyata
Journal:  Nucleic Acids Res       Date:  2002-07-15       Impact factor: 16.971

2.  tRNAscan-SE: a program for improved detection of transfer RNA genes in genomic sequence.

Authors:  T M Lowe; S R Eddy
Journal:  Nucleic Acids Res       Date:  1997-03-01       Impact factor: 16.971

3.  Two new species of true morels from Newfoundland and Labrador: cosmopolitan Morchella eohespera and parochial M. laurentiana.

Authors:  Andrus Voitk; Michael W Beug; Kerry O'Donnell; Michael Burzynski
Journal:  Mycologia       Date:  2015-11-09       Impact factor: 2.696

4.  RAxML version 8: a tool for phylogenetic analysis and post-analysis of large phylogenies.

Authors:  Alexandros Stamatakis
Journal:  Bioinformatics       Date:  2014-01-21       Impact factor: 6.937

5.  High inbreeding, limited recombination and divergent evolutionary patterns between two sympatric morel species in China.

Authors:  Xi-Hui Du; Qi Zhao; Jianping Xu; Zhu L Yang
Journal:  Sci Rep       Date:  2016-03-01       Impact factor: 4.379

6.  Canu: scalable and accurate long-read assembly via adaptive k-mer weighting and repeat separation.

Authors:  Sergey Koren; Brian P Walenz; Konstantin Berlin; Jason R Miller; Nicholas H Bergman; Adam M Phillippy
Journal:  Genome Res       Date:  2017-03-15       Impact factor: 9.043
  6 in total
  1 in total

Review 1.  Mating Systems in True Morels (Morchella).

Authors:  Xi-Hui Du; Zhu L Yang
Journal:  Microbiol Mol Biol Rev       Date:  2021-07-28       Impact factor: 13.044
  1 in total

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