| Literature DB >> 33458042 |
Abstract
Akebia quinata is an herb medicine plant in traditional oriental medicine in China. In this current study, we had assembled the complete chloroplast genome of A. quinata. The complete chloroplast genome sequence of A. quinata has a total 157,817 bp in size and has a typical quadripartite structure, which is the same as other plant species chloroplast genome. It contained a large single-copy (LSC) region of 86,544 bp, a small single-copy (SSC) region of 18,989 bp and two inverted repeat (IR) regions of 26,142 bp. The complete chloroplast genome sequence contains 132 genes, including 87 encoding genes, 37 transfer RNA genes, and eight ribosomal RNA genes. One of IR region harbors seven protein encoding genes, seven tRNA genes, and four rRNA genes. Phylogenetic analysis result showed that A. quinata is closely related to Decaisnea insignis of the family Lardizabalaceae using the maximum-likelihood (ML) method in this study.Entities:
Keywords: Akebia quinata; Lardizabalaceae; chloroplast; genome sequence; phylogenetic analysis
Year: 2020 PMID: 33458042 PMCID: PMC7781986 DOI: 10.1080/23802359.2020.1797557
Source DB: PubMed Journal: Mitochondrial DNA B Resour ISSN: 2380-2359 Impact factor: 0.658