Literature DB >> 33458041

The complete chloroplast genome of Verbascum chinense (L.) Santapau.

Yanxia He1, Yuanyuan Ma2, Zhengying Li1, Peng Liu2, Wangjun Yuan2.   

Abstract

Verbascum chinense is a perennial plant in the Scrophulariaceae family that is traditionally used as sedative, astringent, febrifuge, and for skin eruptions. Here, we determined the complete chloroplast(cp) genome sequence for V. chinense using genome skimming sequencing. The cp genome was 153,618 bp and consisted of a large single copy (LSC) region (84,834 bp), a small single copy (SSC) region (17,884 bp), and two inverted repeats (IRs) (25,450 bp). It encodes 114 unique genes, including 80 protein-coding genes, four rRNAs, and 30 tRNAs. Phylogenetic analysis indicates that V. chinense exhibits a closer relationship with V. phoeniceum rather than Scrophularia.
© 2020 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group.

Entities:  

Keywords:  Chloroplast genome; Verbascum chinense; phylogenetic tree

Year:  2020        PMID: 33458041      PMCID: PMC7782814          DOI: 10.1080/23802359.2020.1797556

Source DB:  PubMed          Journal:  Mitochondrial DNA B Resour        ISSN: 2380-2359            Impact factor:   0.658


  4 in total

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Authors:  Milen I Georgiev; Kashif Ali; Kalina Alipieva; Robert Verpoorte; Young Hae Choi
Journal:  Phytochemistry       Date:  2011-07-30       Impact factor: 4.072

2.  RAxML version 8: a tool for phylogenetic analysis and post-analysis of large phylogenies.

Authors:  Alexandros Stamatakis
Journal:  Bioinformatics       Date:  2014-01-21       Impact factor: 6.937

3.  The Complete Chloroplast Genome of Chinese Bayberry (Morella rubra, Myricaceae): Implications for Understanding the Evolution of Fagales.

Authors:  Lu-Xian Liu; Rui Li; James R P Worth; Xian Li; Pan Li; Kenneth M Cameron; Cheng-Xin Fu
Journal:  Front Plant Sci       Date:  2017-06-30       Impact factor: 5.753

4.  The First Genetic Map in Sweet Osmanthus (Osmanthus fragrans Lour.) Using Specific Locus Amplified Fragment Sequencing.

Authors:  Yanxia He; Wangjun Yuan; Meifang Dong; Yuanji Han; Fude Shang
Journal:  Front Plant Sci       Date:  2017-09-22       Impact factor: 5.753

  4 in total
  2 in total

1.  Taxonomy, comparative genomics of Mullein (Verbascum, Scrophulariaceae), with implications for the evolution of Verbascum and Lamiales.

Authors:  Xiang Dong; Elijah Mbandi Mkala; Elizabeth Syowai Mutinda; Jia-Xin Yang; Vincent Okelo Wanga; Millicent Akinyi Oulo; Victor Omondi Onjolo; Guang-Wan Hu; Qing-Feng Wang
Journal:  BMC Genomics       Date:  2022-08-08       Impact factor: 4.547

2.  The complete chloroplast genome of Verbascum thapsus L. (Scrophulariaceae) and its phylogenetic affinities.

Authors:  Yue Zhang; Yun-Hui Guan; Cheng-Zhao Pu; Yi-Jia Xi; Ai-En Tao; Cong-Long Xia
Journal:  Mitochondrial DNA B Resour       Date:  2022-09-02       Impact factor: 0.610

  2 in total

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