Literature DB >> 33458024

Characterization of the complete chloroplast genome of Aconitum flavum (Ranunculaceae).

Yi Liu1, Shuhua Yu2, Fengming You1.   

Abstract

Aconitum flavum, a traditional Chinese medicine. The complete chloroplast genome sequence is 155,654 bp in length, with one large single copy region of 86,390 bp, one small single copy region of 16,968 bp, and two inverted repeat (IR) regions of 26,148 bp. It contains 129 genes, including 83 protein-coding genes, 8 ribosomal RNA, and 37 transfer RNA. Phylogenetic tree shows that this species is a sister to A. brachypodum.
© 2020 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group.

Entities:  

Keywords:  Aconitum flavum; Chinese medicine; Ranunculaceae; chloroplast genome; phylogenetic tree

Year:  2020        PMID： 33458024      PMCID： PMC7781867          DOI： 10.1080/23802359.2020.1787894

Source DB:  PubMed          Journal:  Mitochondrial DNA B Resour        ISSN： 2380-2359            Impact factor:   0.658


  7 in total

1.  Establishment of a bioassay for the toxicity evaluation and quality control of Aconitum herbs.

Authors:  Yi Qin; Jia-bo Wang; Yan-ling Zhao; Li-mei Shan; Bao-cai Li; Fang Fang; Cheng Jin; Xiao-he Xiao
Journal:  J Hazard Mater       Date:  2011-11-11       Impact factor: 10.588

2.  MAFFT multiple sequence alignment software version 7: improvements in performance and usability.

Authors:  Kazutaka Katoh; Daron M Standley
Journal:  Mol Biol Evol       Date:  2013-01-16       Impact factor: 16.240

Review 3.  Aconitum in traditional Chinese medicine: a valuable drug or an unpredictable risk?

Authors:  Judith Singhuber; Ming Zhu; Sonja Prinz; Brigitte Kopp
Journal:  J Ethnopharmacol       Date:  2009-08-03       Impact factor: 4.360

4.  Geneious Basic: an integrated and extendable desktop software platform for the organization and analysis of sequence data.

Authors:  Matthew Kearse; Richard Moir; Amy Wilson; Steven Stones-Havas; Matthew Cheung; Shane Sturrock; Simon Buxton; Alex Cooper; Sidney Markowitz; Chris Duran; Tobias Thierer; Bruce Ashton; Peter Meintjes; Alexei Drummond
Journal:  Bioinformatics       Date:  2012-04-27       Impact factor: 6.937

5.  Plann: A command-line application for annotating plastome sequences.

Authors:  Daisie I Huang; Quentin C B Cronk
Journal:  Appl Plant Sci       Date:  2015-08-10       Impact factor: 1.936

6.  RAxML version 8: a tool for phylogenetic analysis and post-analysis of large phylogenies.

Authors:  Alexandros Stamatakis
Journal:  Bioinformatics       Date:  2014-01-21       Impact factor: 6.937

7.  NOVOPlasty: de novo assembly of organelle genomes from whole genome data.

Authors:  Nicolas Dierckxsens; Patrick Mardulyn; Guillaume Smits
Journal:  Nucleic Acids Res       Date:  2017-02-28       Impact factor: 16.971
  7 in total
  2 in total

1.  Sequencing and characterization of the chloroplast genome of Aconitum forrestii Stapf provide insights into phylogenetics in Aconitum.

Authors:  Mei-Hua Yang; Cong-Long Xia; Yun-Hui Guan; Hai-Zhu Zhang; Xu-Bing Chen; Ying Wang
Journal:  Mitochondrial DNA B Resour       Date:  2022-06-24       Impact factor: 0.610

2.  The complete chloroplast genome of Aconitum scaposum.

Authors:  Min Zhang; Jiawei Luo; Lijun Su; Qiaojiao Ding; Xianmei Yin; Feixia Hou; Jihai Gao; Cheng Peng
Journal:  Mitochondrial DNA B Resour       Date:  2021-06-28       Impact factor: 0.658
  2 in total

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