Literature DB >> 33457930

The complete mitochondrial genome of Ancherythroculter nigrocauda (Cypriniformes, Cyprinidae) and its phylogenetic position.

Ping Li1, Huamei Pan2, Jinjin Wang2.   

Abstract

The complete mitochondrial genome of Ancherythroculter nigrocauda was determined in this study. It contained 1 replication origin, 1 control region (D-Loop), 2 rRNA genes, 13 PCGs, and 22 tRNA genes with the base composition 31.40% A, 25.00% T, 27.60% C, and 16.00% G. Here, we compared this newly determined mitogenome with another one from the same species reported before. The variable sites and the genetic distances between the two mitogenomes were 608 bp and 0.038, respectively. The results from the phylogenetic analysis showed that the genus Ancherythroculter is not a monophyletic group and Ancherythroculter nigrocauda demonstrates a close relationship with Chanodichthys dabryi.
© 2020 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group.

Entities:  

Keywords:  Ancherythroculter nigrocauda; Mitochondrial DNA; Oxygastrinae; phylogeny

Year:  2020        PMID: 33457930      PMCID: PMC7782904          DOI: 10.1080/23802359.2020.1787902

Source DB:  PubMed          Journal:  Mitochondrial DNA B Resour        ISSN: 2380-2359            Impact factor:   0.658


  7 in total

1.  The complete mitochondrial genome of Chinese rare minnow, Gobiocypris rarus (Teleostei: Cypriniformes).

Authors:  Jinjin Wang; Ping Li; Yaoguang Zhang; Zuogang Peng
Journal:  Mitochondrial DNA       Date:  2011-10

2.  The complete mitochondrial genome of the spotted steed, Hemibarbus maculatus (Teleostei, Cypriniformes).

Authors:  Ping Li; Dandan Xu; Zuogang Peng; Yaoguang Zhang
Journal:  Mitochondrial DNA       Date:  2012-02

3.  The complete mitochondrial genome sequence of Ancherythroculter nigrocauda (Cypriniformes:Cyprinidae).

Authors:  Quan Wan; Ying Chen; Qiqun Cheng; Huiying Qiao
Journal:  Mitochondrial DNA       Date:  2013-03-01

4.  MITOS: improved de novo metazoan mitochondrial genome annotation.

Authors:  Matthias Bernt; Alexander Donath; Frank Jühling; Fabian Externbrink; Catherine Florentz; Guido Fritzsch; Joern Pütz; Martin Middendorf; Peter F Stadler
Journal:  Mol Phylogenet Evol       Date:  2012-09-07       Impact factor: 4.286

5.  IQ-TREE: a fast and effective stochastic algorithm for estimating maximum-likelihood phylogenies.

Authors:  Lam-Tung Nguyen; Heiko A Schmidt; Arndt von Haeseler; Bui Quang Minh
Journal:  Mol Biol Evol       Date:  2014-11-03       Impact factor: 16.240

6.  UFBoot2: Improving the Ultrafast Bootstrap Approximation.

Authors:  Diep Thi Hoang; Olga Chernomor; Arndt von Haeseler; Bui Quang Minh; Le Sy Vinh
Journal:  Mol Biol Evol       Date:  2018-02-01       Impact factor: 16.240

7.  ModelFinder: fast model selection for accurate phylogenetic estimates.

Authors:  Subha Kalyaanamoorthy; Bui Quang Minh; Thomas K F Wong; Arndt von Haeseler; Lars S Jermiin
Journal:  Nat Methods       Date:  2017-05-08       Impact factor: 28.547

  7 in total

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