Literature DB >> 33457911

The complete mitochondrial genome of Sarcophaga scopariiformis (Diptera: Sarcophagidae).

Weifeng Wang1, Chaojun Wang1, Yueting She1, Qin Zeng1, Wei Mao1, Xiaoping Gu1, Hao Yuan1, Xiaoling Pan1, Yong Wang2.   

Abstract

Sarcophaga scopariiformis (Diptera: Sarcophagidae), a potential vector of pathogens as well as one of the important flesh fly specie in forensic entomology. We have firstly sequenced and assembled the whole mitogenome of S. scopariiformis in this study. The circular mitogenome is 15,325 bp in length, consisting of A (39.3%), G (9.4%), T (36.8%), and C (14.5%). It showed in a typical mitochondrial genome similar to other sarcophagids species, which is composed of 13 protein-coding genes (PCGs), 22 transfer RNA genes (tRNA), 2 ribosomal RNA genes (rRNA), and a non-coding AT-rich region. Moreover, the phylogenetic analysis based on 13 PCGs has been conducted. The topological structure of the phylogenetic tree clearly indicated that S. scopariiformis was more closed to the species of Sarcophaga peregrina in genetic distance, compared to the other sarcophagids species. This study provided a useful data reference for genetic structure and phylogenetic analysis of Sarcophagidae.
© 2020 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group.

Entities:  

Keywords:  mitochondrial genome; Sarcophaga scopariiformis; Sarcophagidae

Year:  2020        PMID: 33457911      PMCID: PMC7782300          DOI: 10.1080/23802359.2020.1787269

Source DB:  PubMed          Journal:  Mitochondrial DNA B Resour        ISSN: 2380-2359            Impact factor:   0.658


  4 in total

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Authors:  Sudhir Kumar; Glen Stecher; Koichiro Tamura
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Journal:  Zookeys       Date:  2016-01-07       Impact factor: 1.546

4.  Reconstructing mitochondrial genomes directly from genomic next-generation sequencing reads--a baiting and iterative mapping approach.

Authors:  Christoph Hahn; Lutz Bachmann; Bastien Chevreux
Journal:  Nucleic Acids Res       Date:  2013-05-09       Impact factor: 16.971

  4 in total

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