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Literature DB >> 33457908

Complete mitogenome of the entomopathogenic fungus Orbiocrella petchii.

Wei-Rong Wang¹, Yu-Xi Chen², Zhong Yan², Xiu-Yan Wei², Jun-Zhi Qiu², Yong-Jie Zhang¹.

Abstract

In this study, the complete mitogenome of an entomopathogenic fungus Orbiocrella petchii (syn. Torrubiella petchii) was assembled and annotated. This circular mitogenome was 23,794 bp in length and consisted of 2 rRNA genes (rnl and rns), 25 tRNA genes, and 14 standard protein-coding genes of the oxidative phosphorylation system. Two group I introns were identified, and they encoded ribosomal protein S3 (in rnl) or a GIY-YIG endonuclease (in nad1). Phylogenetic analysis based on mitochondrial DNA sequences confirms O. petchii in the family of Clavicipitaceae.

Entities: Chemical Disease Species

Keywords: Clavicipitaceae; Orbiocrella petchii; Torrubiella petchii; mitogenome

Year: 2020 PMID： 33457908 PMCID： PMC7781985 DOI： 10.1080/23802359.2020.1787258

Source DB: PubMed Journal: Mitochondrial DNA B Resour ISSN： 2380-2359 Impact factor: 0.658

8 in total

1. A new nomenclature of group I introns in ribosomal DNA.

Authors: S Johansen; P Haugen
Journal: RNA Date: 2001-07 Impact factor: 4.942

2. Systematics and evolution of the genus Torrubiella (Hypocreales, Ascomycota).

Authors: Desiree Johnson; Gi-Ho Sung; Nigel L Hywel-Jones; J Jennifer Luangsa-Ard; Joseph F Bischoff; Ryan M Kepler; Joseph W Spatafora
Journal: Mycol Res Date: 2008-10-04

3. HomBlocks: A multiple-alignment construction pipeline for organelle phylogenomics based on locally collinear block searching.

Authors: Guiqi Bi; Yunxiang Mao; Qikun Xing; Min Cao
Journal: Genomics Date: 2017-08-03 Impact factor: 5.736

4. Genomic analyses reveal low mitochondrial and high nuclear diversity in the cyclosporin-producing fungus Tolypocladium inflatum.

Authors: Yong-Jie Zhang; Xiao-Qing Yang; Shu Zhang; Richard A Humber; Jianping Xu
Journal: Appl Microbiol Biotechnol Date: 2017-10-15 Impact factor: 4.813

Complete mitogenome of the entomopathogenic fungus Orbiocrella petchii.

1. A new nomenclature of group I introns in ribosomal DNA.

2. Systematics and evolution of the genus Torrubiella (Hypocreales, Ascomycota).

3. HomBlocks: A multiple-alignment construction pipeline for organelle phylogenomics based on locally collinear block searching.

4. Genomic analyses reveal low mitochondrial and high nuclear diversity in the cyclosporin-producing fungus Tolypocladium inflatum.

5. RAxML version 8: a tool for phylogenetic analysis and post-analysis of large phylogenies.

6. NOVOPlasty: de novo assembly of organelle genomes from whole genome data.

7. Proposal of a new nomenclature for introns in protein-coding genes in fungal mitogenomes.

8. Complete mitogenome of the entomopathogenic fungus Akanthomyces lecanii.