Literature DB >> 33457872

The complete mitochondrial genome of Cladobotryum mycophilum (Hypocreales: Sordariomycetes).

Cheng Chen1, Jian Wang1, Rongtao Fu1, Xiaojuan Chen1, Xuejuan Chen1, Daihua Lu1.   

Abstract

Cladobotryum mycophilum is the causal agent of cobweb disease in many important mushroom crops. In this study, we report the complete mitochondrial genome of C. mycophilum for the first time. The genome is 78,729 bp long and comprises 52 protein-coding genes (PCGs), 2 ribosomal RNA genes (rRNA), and 26 transfer RNA (tRNA) genes. The nucleotide composition of C. mycophilum mitochondrial genome is as follows: A (38.06%), T (34.68%), C (12.19%), and G (15.07%). Phylogenetic analysis revealed that C. mycophilum had a close relationship with Cladobotryum varium from Hypocreaceae. This study provided a basis for studies of the mitochondrial evolution of Hypocreaceae.
© 2020 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group.

Entities:  

Keywords:  Cladobotryum mycophilum; mitogenome; phylogenetic analysis

Year:  2020        PMID： 33457872      PMCID： PMC7782004          DOI： 10.1080/23802359.2020.1742600

Source DB:  PubMed          Journal:  Mitochondrial DNA B Resour        ISSN： 2380-2359            Impact factor:   0.658


  6 in total

1.  Genetic and morphological characterization of Cladobotryum species causing cobweb disease of mushrooms.

Authors:  G J McKay; D Egan; E Morris; C Scott; A E Brown
Journal:  Appl Environ Microbiol       Date:  1999-02       Impact factor: 4.792

2.  MrBayes 3.2: efficient Bayesian phylogenetic inference and model choice across a large model space.

Authors:  Fredrik Ronquist; Maxim Teslenko; Paul van der Mark; Daniel L Ayres; Aaron Darling; Sebastian Höhna; Bret Larget; Liang Liu; Marc A Suchard; John P Huelsenbeck
Journal:  Syst Biol       Date:  2012-02-22       Impact factor: 15.683

3.  tRNAscan-SE On-line: integrating search and context for analysis of transfer RNA genes.

Authors:  Todd M Lowe; Patricia P Chan
Journal:  Nucleic Acids Res       Date:  2016-05-12       Impact factor: 16.971

4.  Genome Sequencing of Cladobotryum protrusum Provides Insights into the Evolution and Pathogenic Mechanisms of the Cobweb Disease Pathogen on Cultivated Mushroom.

Authors:  Frederick Leo Sossah; Zhenghui Liu; Chentao Yang; Benjamin Azu Okorley; Lei Sun; Yongping Fu; Yu Li
Journal:  Genes (Basel)       Date:  2019-02-08       Impact factor: 4.096

5.  Reconstructing mitochondrial genomes directly from genomic next-generation sequencing reads--a baiting and iterative mapping approach.

Authors:  Christoph Hahn; Lutz Bachmann; Bastien Chevreux
Journal:  Nucleic Acids Res       Date:  2013-05-09       Impact factor: 16.971

6.  Analysis of the Mitochondrial Genome in Hypomyces aurantius Reveals a Novel Twintron Complex in Fungi.

Authors:  Youjin Deng; Qihui Zhang; Ray Ming; Longji Lin; Xiangzhi Lin; Yiying Lin; Xiao Li; Baogui Xie; Zhiqiang Wen
Journal:  Int J Mol Sci       Date:  2016-06-30       Impact factor: 5.923
  6 in total
  1 in total

Review 1.  Control of Fungal Diseases in Mushroom Crops while Dealing with Fungicide Resistance: A Review.

Authors:  Francisco J Gea; María J Navarro; Milagrosa Santos; Fernando Diánez; Jaime Carrasco
Journal:  Microorganisms       Date:  2021-03-12
  1 in total

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