Literature DB >> 33457810

Mitochondrial genome of the silky shark Carcharhinus falciformis from the British Indian Ocean Territory Marine Protected Area.

Shaili Johri1,2, Taylor K Chapple1,3, Elizabeth A Dinsdale2, Robert Schallert1, Barbara A Block1.   

Abstract

We present the first mitochondrial genome of Carcharhinus falciformis from the Chagos Archipelago in the British Indian Ocean Territory (BIOT) Marine Protected Area (MPA). The mitochondrial genome of C. falciformis is 16,701 bp in length and consists of 13 protein-coding genes, 22 tRNA genes, 2 rRNA genes, and a non-coding control region (D-loop). GC content was at 40.1%. The control region was 1063 bp in length. The complete mitogenome sequence of C. falciformis from the BIOT MPA will enable improved conservation measures of the CITES listed species through studies of species distribution, population abundance, fishing pressure and wildlife trade.
© 2020 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group.

Entities:  

Keywords:  CITES; Chagos; Conservation; fin-trade; genomics

Year:  2020        PMID: 33457810      PMCID: PMC7782099          DOI: 10.1080/23802359.2020.1775147

Source DB:  PubMed          Journal:  Mitochondrial DNA B Resour        ISSN: 2380-2359            Impact factor:   0.658


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Authors:  Robert C Edgar
Journal:  Nucleic Acids Res       Date:  2004-03-19       Impact factor: 16.971

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Authors:  Fredrik Ronquist; Maxim Teslenko; Paul van der Mark; Daniel L Ayres; Aaron Darling; Sebastian Höhna; Bret Larget; Liang Liu; Marc A Suchard; John P Huelsenbeck
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4.  'Genome skimming' with the MinION hand-held sequencer identifies CITES-listed shark species in India's exports market.

Authors:  Shaili Johri; Jitesh Solanki; Vito Adrian Cantu; Sam R Fellows; Robert A Edwards; Isabel Moreno; Asit Vyas; Elizabeth A Dinsdale
Journal:  Sci Rep       Date:  2019-03-14       Impact factor: 4.379

  4 in total
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1.  Characterization of the complete mitochondrial genome of blacktip shark Carcharhinus limbatus (Carcharhiniformes: Carcharhinidae).

Authors:  Xiaolin Huang; Zanhu Zhou; Tinghe Lai; Binyuan He; Demin Zhang
Journal:  Mitochondrial DNA B Resour       Date:  2022-02-15       Impact factor: 0.658

2.  Are we there yet? Benchmarking low-coverage nanopore long-read sequencing for the assembling of mitochondrial genomes using the vulnerable silky shark Carcharhinus falciformis.

Authors:  J Antonio Baeza; F J García-De León
Journal:  BMC Genomics       Date:  2022-04-22       Impact factor: 4.547

  2 in total

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